PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100111500001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 475aa MW: 51820.6 Da PI: 6.9988 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.2 | 9.3e-25 | 277 | 327 | 2 | 51 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveit 51 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++t Ote100111500001|100111500001 277 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITT 327 7*********************************************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.4E-27 | 261 | 327 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.49E-22 | 269 | 327 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.112 | 271 | 337 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.3E-24 | 276 | 330 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.6E-21 | 278 | 327 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence Send to blast |
MDRGWGLTLD NSDRVGLFGN KSVFGVNLSP RLDHRSSMLP VHSTPPQGLS FGEVDFFADN 60 KRPANGAVKK EAHSHDEASA ATQLNVNTGL QLVTANTGSD QSTVEDGICY EGDDKRAKNE 120 LAQLQFELER MNGENQRLRG MLNQVNSNYA TLQMHLMTLM QHQQNSTTQQ QEVSDRKPEQ 180 EGNENGAAIV PRQFLELGAN QTAEEQSKSS SEERSVSGSP QNNLEMWRNK RTTREESPES 240 ESWAPAPKTP RVDQSVEATM RKARVSVRAR SEAPMISDGC QWRKYGQKMA KGNPCPRAYY 300 RCTMAVGCPV RKQVQRCAED RTILITTMLL SGSMPSSDAI MNPNFLARTI LPGSSSSNMA 360 TISASAPFPT VTLDLTHSPN SLPHQPPTAT PQFQVPFTSV YGQPIYNQSK FSGLQMSKDV 420 NDNGGQSSQH PQPSFADTLS AATAAITADP NFTAALAAAI SSIITTAQPN NNKQA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-15 | 263 | 327 | 1 | 64 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096037.1 | 0.0 | WRKY transcription factor 6 | ||||
Swissprot | Q9C519 | 1e-128 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A2G9H627 | 0.0 | A0A2G9H627_9LAMI; Uncharacterized protein | ||||
STRING | Migut.M01342.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA945 | 24 | 92 |