PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100111190081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 23865.7 Da PI: 5.4238 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8.2e-09 | 101 | 126 | 6 | 30 |
HHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 6 nerErrRRdriNsafeeLrellPk.a 30 ++ErrRR+r+N++++ Lr+++Pk Ote100111190081|100111190081 101 LMAERRRRKRLNDRLSMLRSIVPKiX 126 589********************955 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.93E-7 | 87 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.01 | 95 | 157 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.9E-7 | 102 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.4E-5 | 102 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
TNPSLLDIIS PAEISNPCPF GEFQPFLEAL TSPELASFYD KDDLQQMAIQ QDYATHLEIG 60 ESLFLDSCFD GSFKVESTQI DNVGQKKSKS KKPEGQPSKN LMAERRRRKR LNDRLSMLRS 120 IVPKIXXXXX XXXXXSIIKL LDKIDKLRDD ESTATQSFFK NHEMQLRNPP KFEVERRSED 180 TRIELCCAAK PGLLLSTLST LDALGLDVQQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099455.1 | 2e-63 | transcription factor bHLH93 | ||||
Swissprot | Q9LSL1 | 2e-34 | BH093_ARATH; Transcription factor bHLH93 | ||||
TrEMBL | A0A0H3YB32 | 8e-77 | A0A0H3YB32_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.H00297.1.p | 1e-48 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA789 | 24 | 97 |
Publications ? help Back to Top | |||
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