PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100111190071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 27363.9 Da PI: 5.2244 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.3 | 3.8e-05 | 109 | 130 | 6 | 27 |
HHHHHHHHHHHHHHHHHHHCTS CS HLH 6 nerErrRRdriNsafeeLrell 27 ++ErrRR+r+N++++ Lr+++ Ote100111190071|100111190071 109 LMAERRRRKRLNDRLSMLRSIM 130 589*****************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.083 | 103 | 153 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.4E-10 | 105 | 162 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.6E-7 | 108 | 160 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.5E-5 | 109 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MELTHHHTTN PSLLDIISPA EISNPCPFGE FQPFLEALTS PELASFYDKD DLQQMAIQQD 60 YATHLEIGES LFLDSCFDGS FKVESTQIDN VGQKKSKSKK PEGQPSKNLM AERRRRKRLN 120 DRLSMLRSIM DRTSILGDTI DYMRELLDKI DKLRDDESTA TQSFFKNHEM QLRNPPKFEV 180 ERRSEDTRIE LCCAAKPGLL LSTLSTLDAL GLDAVEQRSV LSSEDVKQAL FRNAGYGGRC 240 L |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099455.1 | 5e-86 | transcription factor bHLH93 | ||||
Swissprot | Q9LSL1 | 2e-54 | BH093_ARATH; Transcription factor bHLH93 | ||||
TrEMBL | A0A0H3YB32 | 2e-95 | A0A0H3YB32_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.H00297.1.p | 4e-71 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA789 | 24 | 97 |
Publications ? help Back to Top | |||
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