PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100110190051

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 545aa MW: 61066.6 Da PI: 6.6691

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100110190051	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	55.7	9.9e-18	255	283	24	52
RWP-RK 24 eLgvclTvLKriCRqyGIkRWPhRkiksl 52 +Lgvc+T+LKriCRq+GI RWP+Rkik++ Ote100110190051\|100110190051 255 NLGVCPTTLKRICRQHGIFRWPSRKIKKV 283 8**************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.549	190	303	IPR003035	RWP-RK domain
Pfam	PF02042	9.0E-15	255	283	IPR003035	RWP-RK domain
SuperFamily	SSF54277	7.52E-20	457	542	No hit	No description
Gene3D	G3DSA:3.10.20.240	5.9E-22	459	541	No hit	No description
PROSITE profile	PS51745	20.653	461	543	IPR000270	PB1 domain
SMART	SM00666	4.3E-22	461	543	IPR000270	PB1 domain
Pfam	PF00564	1.4E-17	462	541	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence Send to blast
MQSLSRNQNA ALAEIKNILC NICHAHQLPL ALTWIPCSYT ENAAHNETIK VHVGGQNDTH 60 ILCLEETTCY WCDTNMEGFV HACANHFLES GKGLAGKALQ STEPLFYPDI KEFHVSEYPL 120 VHHARKLGLS AAVAIRLRSI YTGLNDYILE FFLPVNVKGS VEQLLLLNNL LETVERISTS 180 LIVVSDTNSK PPVMNDHSPK KFVGTTEMAK DDPPKQTIIG FRRQVEKKKN XXXXXXXXXX 240 XXXXXXXXXX XXXXNLGVCP TTLKRICRQH GIFRWPSRKI KKVDRSLKKI QSVLESVPGM 300 EGGLEFNPTK GGLVATFSMA EFDKSKNTLV QNYVTYETID MKREEFLLDV NHRHGVCCSS 360 KGAEVFDGSR LAALDTEPSL PASLSTTPWM VPSNSFLSKD GNNSWELYSK SNGISSSIVD 420 GDSWSGSGSV VMMSGSSSSS GSLTEKSPQR KEASDVLNEN KITVKATYRE NTVRFKFERA 480 ARCAELYSEV AKRLELEIEE FQLKYVDDDG EWVLLVTDSD LLECLEVLEF LNTRTVKFLV 540 HSINM

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence Send to blast

MQSLSRNQNA ALAEIKNILC NICHAHQLPL ALTWIPCSYT ENAAHNETIK VHVGGQNDTH  60
ILCLEETTCY WCDTNMEGFV HACANHFLES GKGLAGKALQ STEPLFYPDI KEFHVSEYPL  120
VHHARKLGLS AAVAIRLRSI YTGLNDYILE FFLPVNVKGS VEQLLLLNNL LETVERISTS  180
LIVVSDTNSK PPVMNDHSPK KFVGTTEMAK DDPPKQTIIG FRRQVEKKKN XXXXXXXXXX  240
XXXXXXXXXX XXXXNLGVCP TTLKRICRQH GIFRWPSRKI KKVDRSLKKI QSVLESVPGM  300
EGGLEFNPTK GGLVATFSMA EFDKSKNTLV QNYVTYETID MKREEFLLDV NHRHGVCCSS  360
KGAEVFDGSR LAALDTEPSL PASLSTTPWM VPSNSFLSKD GNNSWELYSK SNGISSSIVD  420
GDSWSGSGSV VMMSGSSSSS GSLTEKSPQR KEASDVLNEN KITVKATYRE NTVRFKFERA  480
ARCAELYSEV AKRLELEIEE FQLKYVDDDG EWVLLVTDSD LLECLEVLEF LNTRTVKFLV  540
HSINM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091607.1	1e-172	protein NLP9 isoform X1
Refseq	XP_011091608.1	1e-172	protein NLP9 isoform X1
TrEMBL	A0A2G9H6G1	1e-171	A0A2G9H6G1_9LAMI; Uncharacterized protein
STRING	Migut.G01290.1.p	1e-159	(Erythranthe guttata)