PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100110080201
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family Nin-like
Protein Properties Length: 863aa    MW: 96907.6 Da    PI: 7.6421
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100110080201genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.75.6e-29580631152
                        RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                                   aek+i+l++l+++F++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++
  Ote100110080201|100110080201 580 AEKTITLQVLRQHFAGSLKDAAKSLGVCPTTLKRICRQHGIQRWPSRKIKKV 631
                                   589***********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.109570651IPR003035RWP-RK domain
PfamPF020422.6E-26583631IPR003035RWP-RK domain
SuperFamilySSF542772.24E-20774850No hitNo description
PROSITE profilePS5174522.136774855IPR000270PB1 domain
SMARTSM006663.6E-21774856IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.1E-18776850No hitNo description
PfamPF005648.0E-15776850IPR000270PB1 domain
CDDcd064071.58E-33776850No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 863 aa     Download sequence    Send to blast
MEEGMLPLST VLGNTSEALM DFDYMDGLLL DGCWLEANGS EFPHFDSAAP ISPFESSFAW  60
PTLDFNNGEF GGNPSKADQE ERQRSSFSEN LSISQSRGPQ NHRKSEPYVE NITNPVLSSA  120
QCVNYSGEGS EQSKRWWIGP RASMSVMDRL IQALGYMKSC SGNKDVLIQV WVPVTRGGKR  180
VLTTHDQPFS VDLNCPKLAN YREISVKYDF PADEDSKELV GLPGRVYRNK VPEWTPDVQF  240
FSWEEYPRVG HAQQYDVRGT LAVPVLEQGS QNCLGVFEVI LTTQKIQYRP ELESVCKALE  300
AVDLRSPEVS NVHKAKTCDL SYQAALPEIH EVLRTACETH KLPLAQTWVP CILQGNGGCW  360
NTDENLKNCN APVESACYVG DSRIKGFHEA CSEYHLLKGQ GIVGRAFQTN QPCFSTDVSA  420
CSKTDYPLSH YARMFGLKAA VAIRFRSTST GSADFVLEFF LPKDCNNPDD HKKMLTSLSS  480
IIQNVCQTLR VVTDKELKEE AAFVANPVKS ISIEVPRVDR VQFSRASSRQ ASHQETAISP  540
LGQPDSKSKE GMTFAANTST TCDGTSQYTN RTGEKRRVKA EKTITLQVLR QHFAGSLKDA  600
AKSLGVCPTT LKRICRQHGI QRWPSRKIKK VGHSLQKIQH VINSVQGASG GLQIESFYSN  660
FPELASPNAS RTTHFVSLAF LILQSEFQLQ PKLFERCTTK LVLTKRRRTP XXXXXXXXXX  720
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXRDNALP AGDGRGQKPR ERDGPRIKVT  780
CGEDTIRFRM ERNWRFKDLL HEICRRFGVE NGGGYHLKYL DDDAEWVLLT CDADLEECID  840
VCGSSQTIRL TFLHYSIRAP SSL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074088.10.0protein NLP5-like
RefseqXP_011074089.10.0protein NLP5-like
RefseqXP_020548089.10.0protein NLP5-like
RefseqXP_020548090.10.0protein NLP5-like
SwissprotQ9SFW80.0NLP5_ARATH; Protein NLP5
TrEMBLA0A2G9FXJ20.0A0A2G9FXJ2_9LAMI; Uncharacterized protein
STRINGMigut.N02963.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467