PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100109980161
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 396aa    MW: 42484.8 Da    PI: 6.3651
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100109980161genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1703.7e-22252314163
                                   XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                   e+elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN++Lk+e+++l + ++klk e+
  Ote100109980161|100109980161 252 ERELKRERRKQSNRESARRSRLRKQAETEELAVKVQALNAENMTLKSEINKLIESSEKLKHEN 314
                                   89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.6E-32193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165969.7E-8115207No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-17246312No hitNo description
PfamPF001701.7E-20252314IPR004827Basic-leucine zipper domain
SMARTSM003383.7E-18252316IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.783254317IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-10255311No hitNo description
CDDcd147021.78E-20257305No hitNo description
PROSITE patternPS000360259274IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MGNSEEGKAS KLEKSSSPAV DQNNMHVYPD WAAMQAFYGP RFAVPPYMNS PVASPHTPPP  60
YMWGPPQSMI PPYGAPYAAF YAHGGVYAHP GVPVAGSTMS METPVKSSEN TTDGGFVKKL  120
KEFDGLAXIG NGNSDGTETG TDRRLSDSDE ADGSSDGSNG VAPGAAHNTK KRSVQGSPDK  180
EDAKAHKRGS LAEVGQVSEK IMDAIPLANK PAKAMENGNG ALDLKDPSLS AKSSPNSVPL  240
QSIPNESWLQ SERELKRERR KQSNRESARR SRLRKQAETE ELAVKVQALN AENMTLKSEI  300
NKLIESSEKL KHENAVLIDK LKGAHLGQTE EVNPHNIDDL RLKPVGTVNL LARVNNSDSS  360
DVGNDDSDSY ENSSRSGAKL HQLLDSSPRT DAVAAG
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093357.10.0common plant regulatory factor 1 isoform X3
SwissprotQ990891e-123CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A4D9AHM70.0A0A4D9AHM7_SALSN; Plant G-box-binding factor
STRINGMigut.B01828.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]