PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100109630021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 62aa MW: 6756.65 Da PI: 6.6232 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 27.1 | 9.9e-09 | 45 | 62 | 3 | 20 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGgh 20 v+YkeC+kNhAa++Ggh Ote100109630021|100109630021 45 VVVYKECMKNHAAAIGGH 62 589**************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 2.6E-5 | 46 | 62 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 12.763 | 48 | 62 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 62 aa Download sequence Send to blast |
MEVDLNPTPT STKDDNEIDT PPHTIKPLSF TTAAVHHHHP PPPIVVVYKE CMKNHAAAIG 60 GH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011070997.1 | 3e-16 | zinc-finger homeodomain protein 10 | ||||
TrEMBL | A0A4D8YIB3 | 3e-20 | A0A4D8YIB3_SALSN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400080288 | 4e-11 | (Solanum tuberosum) |