PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100109180262 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 307aa MW: 32737.6 Da PI: 5.3543 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.7 | 7.6e-07 | 168 | 194 | 5 | 30 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 5 hnerErrRRdriNsafeeLrellPk.a 30 h+++Er RR+ri +++ L++l+P+ + Ote100109180262|100109180262 168 HSIAERLRRERIAERIRALQDLVPSvN 194 99**********************944 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.01E-7 | 161 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.451 | 163 | 218 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.7E-7 | 165 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MANNPGEASS DDFFDQILGY PSYAAGSDAN LVVNEAPSPA MMLQLGSGDA SAHLGGIXXX 60 XXXXXXXXXX XXXSGGGGFP LGLSLEQGKG GFNDASGSGK RFHREDVLDS RAISKGGGKL 120 DFNNCSLFSF SGFSWTANGE HCPSSAKSTX XXXXXXVRAR RGQATDPHSI AERLRRERIA 180 ERIRALQDLV PSVNKVLSMS RLGGAGAVAP LVTDIPISSV EVXXXXXXXX XEECSDGGRA 240 QPAWEKWSND GTERQVAKLM EENVGAAMQF LQSKALCIMP VSLASAIYHT HPPDTTSLVK 300 PESDPPS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831677.1 | 1e-121 | PREDICTED: transcription factor UNE12 | ||||
Swissprot | O22768 | 1e-81 | UNE12_ARATH; Transcription factor UNE12 | ||||
TrEMBL | A0A4D9BRU6 | 1e-120 | A0A4D9BRU6_SALSN; Uncharacterized protein | ||||
STRING | Migut.D00370.1.p | 1e-120 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5799 | 24 | 34 |
Publications ? help Back to Top | |||
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