PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100109180262
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 307aa    MW: 32737.6 Da    PI: 5.3543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100109180262genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.77.6e-07168194530
                                   HHHHHHHHHHHHHHHHHHHHCTSCC.C CS
                           HLH   5 hnerErrRRdriNsafeeLrellPk.a 30 
                                   h+++Er RR+ri +++  L++l+P+ +
  Ote100109180262|100109180262 168 HSIAERLRRERIAERIRALQDLVPSvN 194
                                   99**********************944 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-7161198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.451163218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-7165197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MANNPGEASS DDFFDQILGY PSYAAGSDAN LVVNEAPSPA MMLQLGSGDA SAHLGGIXXX  60
XXXXXXXXXX XXXSGGGGFP LGLSLEQGKG GFNDASGSGK RFHREDVLDS RAISKGGGKL  120
DFNNCSLFSF SGFSWTANGE HCPSSAKSTX XXXXXXVRAR RGQATDPHSI AERLRRERIA  180
ERIRALQDLV PSVNKVLSMS RLGGAGAVAP LVTDIPISSV EVXXXXXXXX XEECSDGGRA  240
QPAWEKWSND GTERQVAKLM EENVGAAMQF LQSKALCIMP VSLASAIYHT HPPDTTSLVK  300
PESDPPS
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831677.11e-121PREDICTED: transcription factor UNE12
SwissprotO227681e-81UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A4D9BRU61e-120A0A4D9BRU6_SALSN; Uncharacterized protein
STRINGMigut.D00370.1.p1e-120(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57992434
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]