PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100106800021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 332aa    MW: 37368.3 Da    PI: 5.1031
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100106800021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000423350219
                                  HHHHHHHHHHHHHHHHHH CS
                           HLH  2 rrahnerErrRRdriNsa 19
                                  r +h+e E+rRR++iN++
  Ote100106800021|100106800021 33 RSKHSETEQRRRSKINER 50
                                  899*************85 PP

2HLH23.97.5e-0865971955
                                  HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                  +f+ Lr+l+P++    ++K +Ka+ L ++++YI+ Lq
  Ote100106800021|100106800021 65 RFQILRDLIPEN----DQKRDKASFLLEVIQYIQFLQ 97
                                  69*********9....9*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.3E-1929114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.1563196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.55E-1231113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.06E-1333101No hitNo description
SMARTSM003531.0E-537102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-56597IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MGRSVSHVEE EETHDSYSPT DSKRVDRKAN TLRSKHSETE QRRRSKINER QAFNPFISCP  60
LPLFRFQILR DLIPENDQKR DKASFLLEVI QYIQFLQEKL QMYEGSCQGW SSESTKCLPL  120
RINSGPVESF IEHSQFEKNF YGHEDNMHPT LLSNVQNSVE SDMTGATLYK SADNLPMTTQ  180
NLALDMPLQA AIFESLPGQP HQGSFPESEQ LNQQSQSHFW QGRSCADDCS VPVYSANVEE  240
LKNESGEPGI SNVYSQGLLN SLKSSLQSSG VDLSQTSISV QLDVGKQTNS GSTNDVFSIK  300
DQENAPNLCY GSPMNIGKSY DHPPKRFRAD QT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085580.11e-161transcription factor BIM2 isoform X2
TrEMBLA0A0H3YB410.0A0A0H3YB41_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.H00581.1.p1e-112(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA89471821