PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100103630021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Dof | ||||||||
Protein Properties | Length: 253aa MW: 27975.9 Da PI: 4.4555 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 91 | 9.8e-29 | 36 | 94 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGa...lrnvPvGggrrknkks 61 +cprC s+ntkfCyynnys sqPryfCkaCrryWtk vPvGgg+rk+++s Ote100103630021|100103630021 36 PNCPRCASSNTKFCYYNNYSFSQPRYFCKACRRYWTKXXXxxxXXXVPVGGGCRKSRRS 94 58**********************************9865111578**********987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 6.0E-20 | 22 | 93 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.0E-24 | 36 | 93 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 23.235 | 36 | 93 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MMFSCTTTTV DPYSNSMPIA PLLTTKWKYN NIEIAPNCPR CASSNTKFCY YNNYSFSQPR 60 YFCKACRRYW TKXXXXXXXX XVPVGGGCRK SRRSRAANRQ ADGPNYANTV AAVGATVSTK 120 GSDNGACIDM ADVFAKYVNQ KVDSEESAST GSSSDNGQQS CRLEEINTIV EGEKPLDDLI 180 GDPTMDHLST FHDVSSQQFV YQDCDGFELQ QGVLCDEEIL WSEGTTPVVE QALVQVEDCG 240 LLVPDNDQLR ISA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069612.1 | 2e-59 | dof zinc finger protein DOF1.2 | ||||
TrEMBL | A0A2G9GED8 | 8e-59 | A0A2G9GED8_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |