PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100098800091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 215aa MW: 23862 Da PI: 7.7384 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.3 | 0.00015 | 34 | 82 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +r + erE+ R+++N++f L l + ++ + Ka++L +A++ +k+ Ote100098800091|100098800091 34 KRIHKAEREKMKREHLNESFLALANSLELS----DQNNGKASVLIEATRSMKD 82 688899*********************998....7899999999999987775 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.22E-4 | 31 | 88 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.7E-7 | 32 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 10.264 | 33 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.58E-10 | 34 | 112 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0010106 | Biological Process | cellular response to iron ion starvation | ||||
GO:0055072 | Biological Process | iron ion homeostasis | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence Send to blast |
MQPDIAPIIS SKMAMETSTS GDVSSKKNHG KIPKRIHKAE REKMKREHLN ESFLALANSL 60 ELSDQNNGKA SVLIEATRSM KDMLAQIESL RKENAALLTE SQYVTVEKSE LKDDNSALMA 120 DIDKLRTEIK SKVSNLQLDL NLSPSENHNH DNGALVFPLV QHGGQISTFC ANFQACQEVG 180 AEQLASKHIS TVRKPHARYL TAADKWPSQV LEKQS |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853013.1 | 2e-91 | PREDICTED: transcription factor bHLH47-like | ||||
TrEMBL | A0A4D9BIV4 | 1e-102 | A0A4D9BIV4_SALSN; Uncharacterized protein | ||||
STRING | Migut.D01831.1.p | 6e-91 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4307 | 19 | 34 |