PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100096920011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 432aa MW: 48022 Da PI: 7.478 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.2 | 1.1e-10 | 127 | 169 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k rr+++NReAAr+sR+RKka++++Le +L++ ++L+ Ote100096920011|100096920011 127 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQDLQ 169 6889*************************99888888777765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.7E-6 | 124 | 189 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.278 | 126 | 170 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.0E-8 | 127 | 169 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.07E-7 | 128 | 171 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-8 | 129 | 172 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 131 | 146 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.9E-30 | 209 | 284 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 432 aa Download sequence Send to blast |
NQAGAAAFDF GELEEAIILQ GVNINDHDRK QPLYRPAATL EMFPSWPMRF HQPTTRGSSR 60 SGEESTDSVS ATKNTPSNGH RQPPPPQMDA AGGIHSPTIS ASSQPAANST PEKRRGPGSN 120 SDKMLDAKTL RRLAQNREAA RKSRLRKKAY VQQLESSRMK LTQLEQDLQR ARSQGLLLGG 180 GGVASRSISS GGAIFDVEYA RWLDDDQRHM SQIRTALQAN LSDGDLRLIM DGYITHYDEI 240 FHLKGVAAKS DVFHLITGMW TTPAERCFLW MGGFRPSDLI KMLMVQLDPL TEQQIMGICS 300 LQHSSQQAEE ALSQGLEQLH QSLVDTIANC SVNDGTHHMA VALGKMANLE SFVQQADNLR 360 QQTLHNLHRL LTIRQAARCV LVIGEYYSRL RAVSSLWSSR PIESLIADDY SSQTRTELQM 420 VQFSHSQPFS DN |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088884.1 | 0.0 | transcription factor TGA9 isoform X2 | ||||
Refseq | XP_020552198.1 | 0.0 | transcription factor TGA9 isoform X1 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A4D8ZWL6 | 0.0 | A0A4D8ZWL6_SALSN; Transcription factor TGA | ||||
STRING | Gorai.006G111800.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3683 | 23 | 40 |
Publications ? help Back to Top | |||
---|---|---|---|
|