PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100095340071
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 328aa    MW: 36584.5 Da    PI: 6.3771
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100095340071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.88.3e-08181228432
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC..................... CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkas...................k 32 
                                   +h+ +Er RR++iN ++  L+el+P +                    +
  Ote100095340071|100095340071 181 SHSLAERARREKINAKMKLLQELVPGCKkvtvsdsgllswmhieisfS 228
                                   79***********************98555655555555555555551 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.49E-11175207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.652177255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-5181228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-12181269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.59E-5181260No hitNo description
SMARTSM003531.6E-5183261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-11236271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MEPEFEATQP QFRSGGTSSA FDEFHGLISR PPVTSGSSFT ALLELPPPQA MELLVKEEFP  60
AKHPPPPIFP TDTGLIHRAS KFSIFASADN SLENMKLDAL KQEHLDSEFR RNSSSPAGSD  120
QFLKXXXXXX XXXXXERERK VKESNKRSKN IVANEPSDDH GGGENLPYVH VRARPGQATD  180
SHSLAERARR EKINAKMKLL QELVPGCKKV TVSDSGLLSW MHIEISFSLE KQKLLQEISG  240
TAMVLDEIIN HVQALQRQVE FLSMRLAAVN PGIDADLDSI FAANGSSNET SMFTPPICQE  300
GQVNGTRQLQ FHQLWHCDEL RHCLGQRS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075186.11e-116transcription factor bHLH48-like isoform X2
TrEMBLA0A0H3YC281e-148A0A0H3YC28_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.K00063.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40292342