PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100095340071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 328aa MW: 36584.5 Da PI: 6.3771 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.8 | 8.3e-08 | 181 | 228 | 4 | 32 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC..................... CS HLH 4 ahnerErrRRdriNsafeeLrellPkas...................k 32 +h+ +Er RR++iN ++ L+el+P + + Ote100095340071|100095340071 181 SHSLAERARREKINAKMKLLQELVPGCKkvtvsdsgllswmhieisfS 228 79***********************98555655555555555555551 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.49E-11 | 175 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.652 | 177 | 255 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.5E-5 | 181 | 228 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.9E-12 | 181 | 269 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.59E-5 | 181 | 260 | No hit | No description |
SMART | SM00353 | 1.6E-5 | 183 | 261 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.49E-11 | 236 | 271 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 328 aa Download sequence Send to blast |
MEPEFEATQP QFRSGGTSSA FDEFHGLISR PPVTSGSSFT ALLELPPPQA MELLVKEEFP 60 AKHPPPPIFP TDTGLIHRAS KFSIFASADN SLENMKLDAL KQEHLDSEFR RNSSSPAGSD 120 QFLKXXXXXX XXXXXERERK VKESNKRSKN IVANEPSDDH GGGENLPYVH VRARPGQATD 180 SHSLAERARR EKINAKMKLL QELVPGCKKV TVSDSGLLSW MHIEISFSLE KQKLLQEISG 240 TAMVLDEIIN HVQALQRQVE FLSMRLAAVN PGIDADLDSI FAANGSSNET SMFTPPICQE 300 GQVNGTRQLQ FHQLWHCDEL RHCLGQRS |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011075186.1 | 1e-116 | transcription factor bHLH48-like isoform X2 | ||||
TrEMBL | A0A0H3YC28 | 1e-148 | A0A0H3YC28_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.K00063.1.p | 1e-102 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4029 | 23 | 42 |