PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100095100081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 27663.1 Da PI: 5.4949 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.2 | 6.1e-13 | 189 | 234 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +Av Y+k+Lq Ote100095100081|100095100081 189 SIAERERRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVAYVKHLQ 234 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.557 | 183 | 233 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.27E-15 | 186 | 246 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.24E-11 | 187 | 238 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 7.5E-16 | 188 | 247 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 9.8E-13 | 189 | 239 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.7E-10 | 189 | 234 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042335 | Biological Process | cuticle development | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MQPPRGSGSA ELTRGDGGGL ARYQSAPATW LEALLESAEE QLLSDVVLDI PKPPPIPPSN 60 ASAADMDLEL LESAEGGASS NFLRMNSSPA EFLSLLNSSE GFFSNLGIPA NYEFMPVSVA 120 KRAREAEDMD KISPKKSSSS SSTYSKGEKG RQLQSGTGGS LDAEMDKLLE DSVMCRARAK 180 RGCATHPRSI AERERRTRIS DRIRKLQELV PNMDKQTNTA DMLDEAVAYV KHLQKEIQEL 240 TEHQKKCRCS TKD |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00181 | DAP | Transfer from AT1G35460 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022850253.1 | 1e-102 | transcription factor bHLH80-like | ||||
Refseq | XP_022850254.1 | 1e-102 | transcription factor bHLH80-like | ||||
Refseq | XP_022850255.1 | 1e-102 | transcription factor bHLH80-like | ||||
Refseq | XP_022850256.1 | 1e-102 | transcription factor bHLH80-like | ||||
Swissprot | Q9C8P8 | 9e-69 | BH080_ARATH; Transcription factor bHLH80 | ||||
TrEMBL | A0A4D9A3D5 | 1e-119 | A0A4D9A3D5_SALSN; Uncharacterized protein | ||||
STRING | Migut.N03367.1.p | 2e-97 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11787 | 19 | 23 |