PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100093910031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 158aa MW: 18018.1 Da PI: 8.0967 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.2 | 0.00034 | 2 | 39 | 17 | 53 |
HHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 ++ ++L +l+P +p++ ls + Le Av YI Ote100093910031|100093910031 2 KTLCFKLASLIPDhHLPQPKEFLSQQDQLEYAVAYIEI 39 667789*******654555555**************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 8.58E-5 | 1 | 64 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MKTLCFKLAS LIPDHHLPQP KEFLSQQDQL EYAVAYIEIL TGRIEELRRR KAHLMNTNKM 60 MDYCTNEGRI ESKLQPNLTV KELGSCVEVI LVTGLEKGFR LRDVITIIEQ EAAEVYTIGV 120 SKLPDKTIHT IHAQVKISRV GVDVARISQR IHELISLV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011087146.1 | 2e-49 | uncharacterized protein LOC105168709 | ||||
TrEMBL | A0A4D9A3E4 | 3e-57 | A0A4D9A3E4_SALSN; Uncharacterized protein | ||||
STRING | cassava4.1_017345m | 2e-43 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6083 | 14 | 23 |