PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100093840041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 245aa    MW: 28091.2 Da    PI: 8.784
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100093840041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.1e-1367132155
                                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C.............TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   1 rrrahnerErrRRdriNsafeeLrellPk.as..........kapskKlsKaeiLekAveYIksLq 55 
                                   ++ +hn+ Er RR+++N  +++Lr+llP+ +           ++  kKls   ++ ++ +YI +Lq
  Ote100093840041|100093840041  67 KKLNHNASERDRRKKMNALYANLRSLLPPdDHsvxxxxxxxxSGIRKKLSIPVTVSRVLKYIPELQ 132
                                   6789*************************766**********9999*****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.82E-864136No hitNo description
SuperFamilySSF474596.54E-1364152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-1165153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.65666131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-1067132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-872137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MLAVSPQFCS YGWMLDDPTI QDEQQNLSYF SRERTETTSE SIDLPSPSSK TQPKNGDFAL  60
AGDKTMKKLN HNASERDRRK KMNALYANLR SLLPPDDHSV XXXXXXXXSG IRKKLSIPVT  120
VSRVLKYIPE LQKEVERLIE KKDRLMSKIS MPEEFKNHKI KSTQNSFSAT RISDCEIIIQ  180
ISMPKSEKGS FSEAIFRLEE EGFLMVNASC FESFEGRLFY NLHLQAQDGR VVDAEKLKGK  240
VWPLI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828055.12e-75PREDICTED: transcription factor ORG2-like
TrEMBLA0A0H3Y8X71e-115A0A0H3Y8X7_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.J01664.1.p9e-75(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256