PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100092950111 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 337aa MW: 37796.1 Da PI: 4.8819 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.5 | 2.5e-27 | 8 | 150 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73 lp+G++F+P+d el+ e+L++ k + ++e+i++++ i+ ++P++Lp vk++ + ++fF + ++y++g+r Ote100092950111|100092950111 8 LPAGVKFDPSDVELL-EHLAAXKGVGKldshIFIDEFIPTLEgkegICCTHPENLP-GVKKDGSTIHFFYRITSAYSSGRR 86 799************.556555444442444223334444423444**********.677888999*************** PP NAM 74 knra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k+r ++ +W++tgk+k++++ +g l+g kk++v+y ++ +k+ +++Wvmh+y+l Ote100092950111|100092950111 87 KRRRiqdgesaiKSNMRWHKTGKTKPIME-NGILKGFKKIMVLYatPKTGSKPDRCNWVMHQYHL 150 ***74566655433667************.99************5524556667*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.53E-32 | 3 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.121 | 8 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-11 | 9 | 150 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence Send to blast |
ISHEWPGLPA GVKFDPSDVE LLEHLAAXKG VGKLDSHIFI DEFIPTLEGK EGICCTHPEN 60 LPGVKKDGST IHFFYRITSA YSSGRRKRRR IQDGESAIKS NMRWHKTGKT KPIMENGILK 120 GFKKIMVLYA TPKTGSKPDR CNWVMHQYHL GTDEDEKEGE FVVAKISYQA EKAIDKNEYP 180 SLVKEETDMK TVQAIPMTPK MTTPDPPCHD KTPYSDCLSE DYFLQSFLQE SDHMKEPSHA 240 SYSSRLGDDE YVTGLGANSG AADLSQVDYL LCNEIIEPYA AFADSTQVNF NTSLHDKDAN 300 ASCGISDLYN LELDTPPDFQ SLQFDSQDSV FDSLDRL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor regulating the transcriptional activation response to gamma irradiation (PubMed:19549833). Required for stem-cell death induced by UVB or by gamma irradiation (PubMed:20634150). Not required for ATM activation, but participates in pathways governed by both ATM and ATR sensor kinases (PubMed:19549833). Involved in DNA damage response (DDR) system that regulates cell cycle arrest (PubMed:24399300). Functional homolog of animal p53 (PubMed:24736489). Regulates SMR5 and SMR7 transcription (PubMed:24399300). Regulates DNA repair and cytokinin signaling separately and plays a key role in controlling lateral root formation under genotoxic stress. {ECO:0000269|PubMed:19549833, ECO:0000269|PubMed:20634150, ECO:0000269|PubMed:24399300, ECO:0000305|PubMed:24736489}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not induced by zeocin or ionizing radiation treatment. {ECO:0000269|PubMed:23907539}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097382.1 | 1e-158 | SUPPRESSOR OF GAMMA RESPONSE 1 | ||||
Swissprot | Q6NQK2 | 7e-67 | NAC8_ARATH; SUPPRESSOR OF GAMMA RESPONSE 1 | ||||
TrEMBL | A0A2G9GBK2 | 1e-155 | A0A2G9GBK2_9LAMI; Uncharacterized protein | ||||
STRING | XP_009622368.1 | 1e-115 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8175 | 22 | 29 |