PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100092950061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 1124aa MW: 125563 Da PI: 7.6354

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100092950061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	84.5	2.2e-26	795	937	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73 lp+G++F+P+d el+ e+L++ k + ++e+i++++ i+ ++P++Lp vk++ + ++fF + ++y++g+r Ote100092950061\|100092950061 795 LPAGVKFDPSDVELL-EHLAAXKGVGKldshIFIDEFIPTLEgkegICCTHPENLP-GVKKDGSTIHFFYRITSAYSSGRR 873 799**********.556555444442444223334444423444******.677888999*********** PP NAM 74 knra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k+r ++ +W++tgk+k++++ +g l+g kk++v+y ++ +k+ +++Wvmh+y+l Ote100092950061\|100092950061 874 KRRRiqdgesaiKSNMRWHKTGKTKPIME-NGILKGFKKIMVLYatPKTGSKPDRCNWVMHQYHL 937 74566655433667*********.99********5524556667*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00220	1.0E-7	1	337	IPR000719	Protein kinase domain
Pfam	PF00069	1.7E-23	1	100	IPR000719	Protein kinase domain
Gene3D	G3DSA:1.10.510.10	1.1E-28	1	101	No hit	No description
PROSITE profile	PS50011	20.994	1	217	IPR000719	Protein kinase domain
SuperFamily	SSF56112	3.24E-32	2	102	IPR011009	Protein kinase-like domain
PROSITE pattern	PS00108	0	49	61	IPR008271	Serine/threonine-protein kinase, active site
SuperFamily	SSF101941	1.83E-32	780	956	IPR003441	NAC domain
PROSITE profile	PS51005	29.121	795	956	IPR003441	NAC domain
Pfam	PF02365	1.7E-10	796	937	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006468	Biological Process	protein phosphorylation
GO:0005739	Cellular Component	mitochondrion
GO:0009536	Cellular Component	plastid
GO:0003677	Molecular Function	DNA binding
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Sequence ? help Back to Top
Protein Sequence Length: 1124 aa Download sequence Send to blast
MVIVTELLLG GTLRKYLLNL RPRCLDMRVA IGFSLDIARA MECLHSHGII HRDLKPENLL 60 LTADQQTIKL ADFGLAREES LTEMMTAETG TYRWMAPELY STVTLRQGEK KHYNHKAAYA 120 AAFKVTLLVF YLWLVECEAK RRRATARFGL NRYFVLEGGP QCAAQLHSDN THAPALSIDD 180 FTSXXAVPPR ILTNKNAVFP PESPGTSSLM AKRGDDLGYG DAGGSACIDF GDEEMRCFTL 240 VQRRVKFLHF LNVGHQRGGG GSFSFFHGYE LSSKPHRITK RYAFLYTREY MKMEPLTIVV 300 DELKRLTKTA NDFAHGCFNF SRRSPIQILK RLQREAFSDI MKLRDRQDKV ERLLALYKSS 360 KGGPFQEAST HVRGNVDVQG AVFVMDDVDD HKYDVIQRSG IKTGIHARLR FEAVVREKDQ 420 LSAEFTANGT SDMQGGSLSL AKVLYTAHFN DWFSALAIPV GAQCRDVGLT TSTHQEKGLT 480 GNSHSGPPLL HQNNGSAIGI KLNKANVVAS LAQFVSSHGR TNESARTFST FAQIVWQLTR 540 YTNLSLLGVH KVPRAPCRSI RLGALSFPIS MQKHNRISET SVEEDSPRSR QRYNSDGAVS 600 LMVNSEIDDN TKIGAWIETK TSNPGHLQWA VMMSDSPEDG LGYGLSVGGI LQGPKSLKQF 660 QVETYLNMKF GGRFNLQPGL VYVKDEVTQF PALMVFPLIH TRLLNAVYVG KGKVSDTLFA 720 TPNENAFYHL SILRSNFSLS MARSWIIDSR ALAKKVINAG QPTAYQIKDC GANTRCPNCQ 780 YLIDNSDISH EWPGLPAGVK FDPSDVELLE HLAAXKGVGK LDSHIFIDEF IPTLEGKEGI 840 CCTHPENLPG VKKDGSTIHF FYRITSAYSS GRRKRRRIQD GESAIKSNMR WHKTGKTKPI 900 MENGILKGFK KIMVLYATPK TGSKPDRCNW VMHQYHLGTD EDEKEGEFVV AKISYQAEKA 960 IDKNEYPSLV KEETDMKTVQ AIPMTPKMTT PDPPCHDKTP YSDCLSEDYF LQSFLQESDH 1020 MKEPSHASYS SRLGDDEYVT GLGANSGAAD LSQVDYLLCN EIIEPYAAFA DSTQVNFNTS 1080 LHDKDANASC GISDLYNLEL DTPPDFQSLQ FDSQDSVFDS LDRL

Sequence ? help Back to Top

Protein Sequence Length: 1124 aa Download sequence Send to blast

MVIVTELLLG GTLRKYLLNL RPRCLDMRVA IGFSLDIARA MECLHSHGII HRDLKPENLL  60
LTADQQTIKL ADFGLAREES LTEMMTAETG TYRWMAPELY STVTLRQGEK KHYNHKAAYA  120
AAFKVTLLVF YLWLVECEAK RRRATARFGL NRYFVLEGGP QCAAQLHSDN THAPALSIDD  180
FTSXXAVPPR ILTNKNAVFP PESPGTSSLM AKRGDDLGYG DAGGSACIDF GDEEMRCFTL  240
VQRRVKFLHF LNVGHQRGGG GSFSFFHGYE LSSKPHRITK RYAFLYTREY MKMEPLTIVV  300
DELKRLTKTA NDFAHGCFNF SRRSPIQILK RLQREAFSDI MKLRDRQDKV ERLLALYKSS  360
KGGPFQEAST HVRGNVDVQG AVFVMDDVDD HKYDVIQRSG IKTGIHARLR FEAVVREKDQ  420
LSAEFTANGT SDMQGGSLSL AKVLYTAHFN DWFSALAIPV GAQCRDVGLT TSTHQEKGLT  480
GNSHSGPPLL HQNNGSAIGI KLNKANVVAS LAQFVSSHGR TNESARTFST FAQIVWQLTR  540
YTNLSLLGVH KVPRAPCRSI RLGALSFPIS MQKHNRISET SVEEDSPRSR QRYNSDGAVS  600
LMVNSEIDDN TKIGAWIETK TSNPGHLQWA VMMSDSPEDG LGYGLSVGGI LQGPKSLKQF  660
QVETYLNMKF GGRFNLQPGL VYVKDEVTQF PALMVFPLIH TRLLNAVYVG KGKVSDTLFA  720
TPNENAFYHL SILRSNFSLS MARSWIIDSR ALAKKVINAG QPTAYQIKDC GANTRCPNCQ  780
YLIDNSDISH EWPGLPAGVK FDPSDVELLE HLAAXKGVGK LDSHIFIDEF IPTLEGKEGI  840
CCTHPENLPG VKKDGSTIHF FYRITSAYSS GRRKRRRIQD GESAIKSNMR WHKTGKTKPI  900
MENGILKGFK KIMVLYATPK TGSKPDRCNW VMHQYHLGTD EDEKEGEFVV AKISYQAEKA  960
IDKNEYPSLV KEETDMKTVQ AIPMTPKMTT PDPPCHDKTP YSDCLSEDYF LQSFLQESDH  1020
MKEPSHASYS SRLGDDEYVT GLGANSGAAD LSQVDYLLCN EIIEPYAAFA DSTQVNFNTS  1080
LHDKDANASC GISDLYNLEL DTPPDFQSLQ FDSQDSVFDS LDRL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4e3c_A	3e-11	2	99	93	193	Inhibitor of nuclear factor kappa-B kinase subunit beta
4e3c_B	3e-11	2	99	93	193	Inhibitor of nuclear factor kappa-B kinase subunit beta
4e3c_C	3e-11	2	99	93	193	Inhibitor of nuclear factor kappa-B kinase subunit beta
4e3c_D	3e-11	2	99	93	193	Inhibitor of nuclear factor kappa-B kinase subunit beta
4e3c_E	3e-11	2	99	93	193	Inhibitor of nuclear factor kappa-B kinase subunit beta
4e3c_F	3e-11	2	99	93	193	Inhibitor of nuclear factor kappa-B kinase subunit beta