PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100091280041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 518aa MW: 58385.8 Da PI: 5.9934 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.6 | 2e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk Ote100091280041|100091280041 6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATK 85 79****************************.99***************6434555777*********************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +gyWkatgkd++v s +++ vg+kktLv+y+grap+g +tdWvmheyrl Ote100091280041|100091280041 86 AGYWKATGKDRKVNS-QTRGVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 ***************.8899***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.75E-64 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.673 | 6 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRGVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDDRECDT PSSGLQDAYA LCRVFKKSLN IVKIGENNYV SSAWSSSIDL 180 QYCEAKYEDV DCSDYTMSMP LTCSSSVDPT WAQYLSEEAF ISTNNTYPNC SPISYPPSKV 240 DIALECARLQ ERFKLPALEV HDYPAAAFPT DVRMPYDSNH ETDIVLSVAQ HVQNQGGSNM 300 KCLDSIGHEL NHGWIEIGSD NNGRMVDNLR WIGMSDKQLE TASSQDFNTI PIQKISNIQT 360 EFQGETSNPN LNTFTNTETN DNISVTPRDD NVSSNNFLDD GDIIDNFSSN PSFEVYEKVE 420 INHGLLVSTR QAPNTFYHKV VPSKILQVHI NPMISSPKSG FLTPPKTGST MPEEFARTMK 480 PKMMKSQEES GGLKNIKSCL TFALALCAIC VQIVTPFA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-55 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-55 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-55 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-55 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 2e-55 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
4dul_A | 2e-55 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 2e-55 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096933.1 | 0.0 | NAC domain-containing protein 45 | ||||
TrEMBL | A0A2G9GMX5 | 0.0 | A0A2G9GMX5_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00745.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1495 | 23 | 48 |