PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100087080201
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family CPP
Protein Properties Length: 689aa    MW: 75320.9 Da    PI: 6.7974
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100087080201genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR46.66.5e-15334371340
                           TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                                   +k+C+C+kskClk+YC+Cfaag +C+ +C C++C N+ 
  Ote100087080201|100087080201 334 CKRCHCRKSKCLKLYCDCFAAGLYCAGSCACQGCYNRP 371
                                   79**********************************86 PP

2TCR51.71.7e-16421459139
                           TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                                   ++k+gCnCkks ClkkYCeC++a++ Cs+ C+Ce+CkN 
  Ote100087080201|100087080201 421 RHKRGCNCKKSMCLKKYCECYHANVGCSDGCRCEGCKNV 459
                                   589***********************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011148.2E-13332373IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163434.31333461IPR005172CRC domain
PfamPF036388.0E-11335370IPR005172CRC domain
SMARTSM011142.8E-17421462IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.2E-11423459IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 689 aa     Download sequence    Send to blast
MDSVDPKFSL EIINRPSNAA SGSMVTKKPD HICNTMASED VTFSPTALNR EIENVHEVEN  60
ENSLEATAEN VQKIDIEFEN FEEEQAVSSD QSSYVLLGPI HIEEENENYL HAAAAVSKEQ  120
VLRETRNNAE AFQHHGIHRH CLQFEDASNT EINRLAQSPL NGGGTKSPLE TPCTPIKGKE  180
TENTQPMNPQ IINNTVNIPK PSGIGLHLNS IVNVLQAGSS AVVHVKSAQN CNFNIRGKKS  240
IHTSNPHISD RAKGPSVFTP PENISECVDD TEPKTPPSVV VKSDSSLSTV IVKPVTIPVD  300
DQPAQSSKSV YTNIETDAIS KEFKKRSSES SDGCKRCHCR KSKCLKLYCD CFAAGLYCAG  360
SCACQGCYNR PEFEDTVLES RRQIESRNPL AFAPKIVENI VETPASSYGE DEPGLTPSSA  420
RHKRGCNCKK SMCLKKYCEC YHANVGCSDG CRCEGCKNVH GRKGEHRLDK GILSKEGITE  480
KTNSSFVDMM LSGDGGLCPE LTPRTPAVQF FKNNVPEGCL RPKQHHFQSP ESRNSDNSAI  540
ISEAAAEVHD LVSSDQESYY GNAETGRRAN LVRNSEEQSN HSKAHSSSPN SLSWLRSPGT  600
PLAQSSTNRS VKAIDLDGEL SNNTTHDDTP DILKDSPTPL NAVKSSSPNK KRVSPPHATQ  660
HEVRLRSLNG LRSGRKFILK AVPSAPPQK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A4e-1733545912121Protein lin-54 homolog
5fd3_B4e-1733545912121Protein lin-54 homolog
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081944.10.0protein tesmin/TSO1-like CXC 2
TrEMBLA0A4D9AM930.0A0A4D9AM93_SALSN; Uncharacterized protein
STRINGMigut.E01471.1.p1e-168(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA69802128