PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100087080091 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | CPP | ||||||||
Protein Properties | Length: 689aa MW: 75320.9 Da PI: 6.7974 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 46.6 | 6.5e-15 | 334 | 371 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C+C+kskClk+YC+Cfaag +C+ +C C++C N+ Ote100087080091|100087080091 334 CKRCHCRKSKCLKLYCDCFAAGLYCAGSCACQGCYNRP 371 79**********************************86 PP | |||||||
2 | TCR | 51.7 | 1.7e-16 | 421 | 459 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+Ce+CkN Ote100087080091|100087080091 421 RHKRGCNCKKSMCLKKYCECYHANVGCSDGCRCEGCKNV 459 589***********************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 8.2E-13 | 332 | 373 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 34.31 | 333 | 461 | IPR005172 | CRC domain |
Pfam | PF03638 | 8.0E-11 | 335 | 370 | IPR005172 | CRC domain |
SMART | SM01114 | 2.8E-17 | 421 | 462 | IPR033467 | Tesmin/TSO1-like CXC domain |
Pfam | PF03638 | 1.2E-11 | 423 | 459 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 689 aa Download sequence Send to blast |
MDSVDPKFSL EIINRPSNAA SGSMVTKKPD HICNTMASED VTFSPTALNR EIENVHEVEN 60 ENSLEATAEN VQKIDIEFEN FEEEQAVSSD QSSYVLLGPI HIEEENENYL HAAAAVSKEQ 120 VLRETRNNAE AFQHHGIHRH CLQFEDASNT EINRLAQSPL NGGGTKSPLE TPCTPIKGKE 180 TENTQPMNPQ IINNTVNIPK PSGIGLHLNS IVNVLQAGSS AVVHVKSAQN CNFNIRGKKS 240 IHTSNPHISD RAKGPSVFTP PENISECVDD TEPKTPPSVV VKSDSSLSTV IVKPVTIPVD 300 DQPAQSSKSV YTNIETDAIS KEFKKRSSES SDGCKRCHCR KSKCLKLYCD CFAAGLYCAG 360 SCACQGCYNR PEFEDTVLES RRQIESRNPL AFAPKIVENI VETPASSYGE DEPGLTPSSA 420 RHKRGCNCKK SMCLKKYCEC YHANVGCSDG CRCEGCKNVH GRKGEHRLDK GILSKEGITE 480 KTNSSFVDMM LSGDGGLCPE LTPRTPAVQF FKNNVPEGCL RPKQHHFQSP ESRNSDNSAI 540 ISEAAAEVHD LVSSDQESYY GNAETGRRAN LVRNSEEQSN HSKAHSSSPN SLSWLRSPGT 600 PLAQSSTNRS VKAIDLDGEL SNNTTHDDTP DILKDSPTPL NAVKSSSPNK KRVSPPHATQ 660 HEVRLRSLNG LRSGRKFILK AVPSAPPQK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5fd3_A | 4e-17 | 335 | 459 | 12 | 121 | Protein lin-54 homolog |
5fd3_B | 4e-17 | 335 | 459 | 12 | 121 | Protein lin-54 homolog |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081944.1 | 0.0 | protein tesmin/TSO1-like CXC 2 | ||||
TrEMBL | A0A4D9AM93 | 0.0 | A0A4D9AM93_SALSN; Uncharacterized protein | ||||
STRING | Migut.E01471.1.p | 1e-168 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6980 | 21 | 28 |