PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100086320041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 26031.6 Da PI: 10.1358 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8.3e-09 | 60 | 97 | 13 | 55 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R++ N+++ +L+e++P++ K a+iLe +++YI++Lq Ote100086320041|100086320041 60 RQKFNEKMKTLQEIIPNC-----SKSGQASILEDTIKYIQKLQ 97 99***************9.....6888999************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.27E-12 | 46 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.944 | 47 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-4 | 53 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.86E-7 | 56 | 97 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 4.8E-11 | 60 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.5E-6 | 60 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MVDHGPRRVA FPSDGVGKES RDQRNQTNEC EDPMTIKQHK QSRSPQGYKL RRSVCRRLSR 60 QKFNEKMKTL QEIIPNCSKS GQASILEDTI KYIQKLQYQL HLMMSTRAGC CPIPQSWQPG 120 TQISSFAPFL ETIKWSTDKM KYEIATPTPS MLTASGSFRI SGNQPSMISP QQSCRRTGGS 180 RSTMRVLPTQ IVPPQDHVNE DHQSQSGYSL AAQIQNEKAL GSFLFGTNFT S |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15248 | 8 | 8 |