PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100084400041

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 321aa MW: 35664.6 Da PI: 5.24

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100084400041	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.1	2.1e-10	247	287	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Ote100084400041\|100084400041 247 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 287 9****************97.....8****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.843	237	286	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.1E-12	242	301	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.11E-13	242	302	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.1E-11	243	292	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.34E-11	246	291	No hit	No description
Pfam	PF00010	1.2E-7	247	287	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MEGVEAFLDG EWDSLSKLFS CEDSDLLLHS NGSNFFSFDV ENPLSFCDAG ENDATLILPH 60 HSSFLSVSQA SSHSSSTEIE SSQFFPFAHH HHHPAAADFT TGSSVVAPAM FRDDSVEEIL 120 QLKAQMLCND HSSENAVAWP NDVDDSCKEM QLKRKFEDDN DALQTPKKRR PRVSKDVQTS 180 KRNGQSKKAK KATQTTISND ENIVQSASTC SSEEDDCNAS INGASESGGK AKASKIPATD 240 PQSLYARKRR ERINERLRIL QNLVPNGTKV DISTMLEEAV HYVKFLQLQI KLLSSDDKWM 300 YAPIAYNGMD IGLYQKIVPN L

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011074590.1	2e-80	transcription factor bHLH85-like
TrEMBL	A0A022R8Q5	1e-78	A0A022R8Q5_ERYGU; Uncharacterized protein
STRING	Migut.N02774.1.p	2e-79	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA639	22	101