PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100083560091
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 162aa    MW: 18185.2 Da    PI: 9.5094
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100083560091genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-1875125255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp+      r++lg++ t  +Aa+a++ a+ k++g
  Ote100083560091|100083560091  75 HYRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYNTDVDAARAYDCAAFKMRG 125
                                   69*******.**********8542..4**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.1E-3175133IPR001471AP2/ERF domain
PfamPF008474.5E-1375125IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-2375134IPR016177DNA-binding domain
PROSITE profilePS5103224.26375133IPR001471AP2/ERF domain
SMARTSM003804.3E-3675139IPR001471AP2/ERF domain
CDDcd000187.56E-2875133No hitNo description
PRINTSPR003673.1E-137687IPR001471AP2/ERF domain
PRINTSPR003673.1E-13115135IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:1902074Biological Processresponse to salt
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MTTSNVLSVT LELIRHHLLD DADSFFDNVT TLCFSDDVCS DDSVWSSREI DSPSSGSDLN  60
TRPESPISRY FNTGHYRGVR RRPWGKYAAE IRDPTRKGSR VWLGTYNTDV DAARAYDCAA  120
FKMRGRKAIL NFPFEAGKSS PPAHAGRKRR RESIPPPASK SN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-2675134564ATERF1
3gcc_A1e-2675134564ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101099.18e-60ethylene-responsive transcription factor ERF107
SwissprotQ9LY052e-41EF106_ARATH; Ethylene-responsive transcription factor ERF106
TrEMBLA0A4D9BQX54e-62A0A4D9BQX5_SALSN; EREBP-like factor
STRINGSolyc05g052030.1.12e-53(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Publications ? help Back to Top
  1. Kim H,Go YS,Suh MC
    DEWAX2 Transcription Factor Negatively Regulates Cuticular Wax Biosynthesis in Arabidopsis Leaves.
    Plant Cell Physiol., 2018. 59(5): p. 966-977
    [PMID:29425344]