PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100082080001
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 375aa    MW: 41143.3 Da    PI: 5.4193
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100082080001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2422.2e-134884242
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeA 42
                                  +y+GVr+++ +gr++AeIrdp +   + r +lg+f+taeeA
  Ote100082080001|100082080001 48 RYRGVRRRP-WGRYAAEIRDPQT---KERRWLGTFDTAEEA 84
                                  59*******.**********943...4999**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.17448113IPR001471AP2/ERF domain
PfamPF008473.5E-74884IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-134887IPR016177DNA-binding domain
CDDcd000187.59E-194884No hitNo description
Gene3DG3DSA:3.30.730.108.0E-184885IPR001471AP2/ERF domain
SMARTSM003801.5E-94891IPR001471AP2/ERF domain
PRINTSPR003672.8E-84960IPR001471AP2/ERF domain
PRINTSPR003672.8E-87187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MEEALRSLNA GGPIKPXXXX XXXXKRCSAA KRSHKDGVPA PTGSGNMRYR GVRRRPWGRY  60
AAEIRDPQTK ERRWLGTFDT AEEAXXXXXX XXXXXXGXXX XXXXXXXXXX NFVYPASPTQ  120
PAAAPGGGAE NLPPPFGYGK LXXXXXXXXX XXXXXXXXXX PSPFSSPNLD FNRNNSINSH  180
RFLLRDYISS STSKYFDTTN TNYNSFGLSS DFLRNSSSSS SLSTLTSPNF VGSLSDANTL  240
TVHVSAATSL SPESQNLENK NSSILSNDNN CVDFFPTERS DSGLLHEVLN GFLPNSEKEA  300
PPPETPQTAA DAEKHDGKLG FSGDYGGTQF GNLNCTGNLF GFENEFEGAN GSNGILAEIF  360
NYQEAVNLFE ANMQK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A4D8ZZ412e-97A0A4D8ZZ41_SALSN; EREBP-like factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165