PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100080930061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 320aa MW: 36250.3 Da PI: 9.5775 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.9 | 2.2e-54 | 12 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknrat 78 +ppGfrFhPtdeel+ +yLkkkv+ +++++ +vi+evd++k+ePwdL++ ++ + ++ewyfFs++dkky+tg+r+nrat Ote100080930061|100080930061 12 VPPGFRFHPTDEELLYYYLKKKVSYEPIDF-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRAT 91 69****************************.9***************952444443456********************** PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+Wkatg+dk+++ ++++ +g++ktLvfy+grap+g+ktdW+mheyrl Ote100080930061|100080930061 92 AAGFWKATGRDKAIHMSNSRRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 141 ************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-55 | 9 | 148 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.833 | 12 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.3E-28 | 13 | 141 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003002 | Biological Process | regionalization | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009834 | Biological Process | plant-type secondary cell wall biogenesis | ||||
GO:0010455 | Biological Process | positive regulation of cell fate commitment | ||||
GO:0048829 | Biological Process | root cap development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence Send to blast |
MMAGGGNGGL SVPPGFRFHP TDEELLYYYL KKKVSYEPID FDVIREVDLN KLEPWDLKEK 60 CRIGSGPQNE WYFFSHKDKK YPTGTRTNRA TAAGFWKATG RDKAIHMSNS RRIGMRKTLV 120 FYTGRAPHGQ KTDWIMHEYR LDDDNAPHEI QVRRWMGDLQ SFQEEKPHTR IPPRGGSRRA 180 GCTFPRISWL YLGAQSEFRP QSRQFDASSA TDESGIRRSD VVSVVASXXX XXXCPQNVLR 240 LTSGGAGPSA GFIQQPEKIS GGGDWSFLDK LLATHQSMDQ ISKCQQFAQV AEMVPQATQR 300 FTFPYHGGLE SPADFSKFSK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-45 | 10 | 141 | 13 | 140 | Stress-induced transcription factor NAC1 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00250 | DAP | Transfer from AT1G79580 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011095843.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_011095844.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554180.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554181.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554182.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554183.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554184.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554185.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554186.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554187.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554188.1 | 1e-130 | protein SOMBRERO-like | ||||
Refseq | XP_020554189.1 | 1e-130 | protein SOMBRERO-like | ||||
TrEMBL | A0A2G9HTP4 | 1e-128 | A0A2G9HTP4_9LAMI; Uncharacterized protein | ||||
STRING | XP_002521498.1 | 1e-115 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA134 | 24 | 297 |