PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100074380021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 486aa    MW: 53963.2 Da    PI: 7.2043
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100074380021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.3e-11201244447
                                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                                    k+ rr+++NReAAr+sR RKka++++Le    +L++  ++Lkk
  Ote100074380021|100074380021 201 QKALRRLAQNREAARKSRMRKKAYVQQLESSRLKLTQLEQDLKK 244
                                   5889**************************99999999999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-7198290IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.393200244IPR004827Basic-leucine zipper domain
CDDcd147083.51E-21202254No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-8202247No hitNo description
SuperFamilySSF579597.03E-7202245No hitNo description
PfamPF001702.9E-7202245IPR004827Basic-leucine zipper domain
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
PfamPF141442.5E-31285358IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MHTFKAAVTQ XXXXXXXXXX XXCIALLTHP FTSGARKSLL FCANMGEEGG RNGARFSDLG  60
ELEQSPGNGF HHDDAVNLSR TSMYNDLKAS NVSVVSSNLQ FGGLNNSLGS AEMVSTGTGV  120
DSEQFMSHKA TIVRXXXXXX XXXXXNGMFE NWGDSGMVAD HSQQTDTSTD TDDKNQYPGV  180
HNDRLMVVDS MDHLKGKLGD QKALRRLAQN REAARKSRMR KKAYVQQLES SRLKLTQLEQ  240
DLKKARQQGT FAAPGFSTDH CLGGNGALAF DIDYARWLDE HQRLINELRA AVNAHMGDGE  300
LRLLVEGVMS HYDEIFRLKS VGAKSDVFHM LSGMWKTPAE RCFMWLGGFR CSEVLKILGN  360
QIEPLTEQQL VGICNLQQSS QQAEDALSQG MEALQQSLVE TLSSNAVAPR NSGNVADYMG  420
QMAIAMSKLA TLENFLHQAD LLRQQTLQQL QQILTTRQAA RALLAISDYR SRLRALSSLW  480
LARPKE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077152.10.0transcription factor HBP-1b(c38)-like
SwissprotQ415581e-167HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A4D9A4X80.0A0A4D9A4X8_SALSN; Transcription factor TGA
STRINGVIT_01s0011g03230.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385