PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100073880032
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 346aa    MW: 38276.9 Da    PI: 5.2731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100073880032genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.3e-10191239355
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Ote100073880032|100073880032 191 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKALMLDEIINYVQSLQ 239
                                   58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.14E-16186256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.059188238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-16190258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-7191239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.54E-10192243No hitNo description
SMARTSM003532.7E-9194244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MGSEGSGDEV FQQRGMVGTN SISDKVSGVE SIFYGSNWES IMPQSEFANP LTLENQKMDS  60
SLVEFPSDSG LDLVPRIPTF ESGSFSEMAT SNLPHKKGIS HEFCPNSYGK RKREVIQGAS  120
SPTNAEEEQK KDPSGDTSEF PKDDAEKKQI FEKNIDRGKQ VSKQANDNSS GAEPSKDNYI  180
HVRAKRGHAT NSHSLAERVR RERISERMRL LQELVPGCNK ITGKALMLDE IINYVQSLQQ  240
QVEFLSMKLA TVNPELNMDI DRILSKDILH LCGNNANSLG ISPGLSSTLP FPLYPQGIFN  300
NAPSMTAFHS LPQHVWNNEV QSLLQMGFDP DPPVSMGQNG LSKMEL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011069808.11e-137transcription factor bHLH74
SwissprotQ6NKN94e-63BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A0H3Y7H61e-176A0A0H3Y7H6_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.N02799.1.p1e-108(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52502435
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]