PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100073880032 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 346aa MW: 38276.9 Da PI: 5.2731 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.3e-10 | 191 | 239 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq Ote100073880032|100073880032 191 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKALMLDEIINYVQSLQ 239 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.14E-16 | 186 | 256 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.059 | 188 | 238 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.9E-16 | 190 | 258 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.8E-7 | 191 | 239 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.54E-10 | 192 | 243 | No hit | No description |
SMART | SM00353 | 2.7E-9 | 194 | 244 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence Send to blast |
MGSEGSGDEV FQQRGMVGTN SISDKVSGVE SIFYGSNWES IMPQSEFANP LTLENQKMDS 60 SLVEFPSDSG LDLVPRIPTF ESGSFSEMAT SNLPHKKGIS HEFCPNSYGK RKREVIQGAS 120 SPTNAEEEQK KDPSGDTSEF PKDDAEKKQI FEKNIDRGKQ VSKQANDNSS GAEPSKDNYI 180 HVRAKRGHAT NSHSLAERVR RERISERMRL LQELVPGCNK ITGKALMLDE IINYVQSLQQ 240 QVEFLSMKLA TVNPELNMDI DRILSKDILH LCGNNANSLG ISPGLSSTLP FPLYPQGIFN 300 NAPSMTAFHS LPQHVWNNEV QSLLQMGFDP DPPVSMGQNG LSKMEL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069808.1 | 1e-137 | transcription factor bHLH74 | ||||
Swissprot | Q6NKN9 | 4e-63 | BH074_ARATH; Transcription factor bHLH74 | ||||
TrEMBL | A0A0H3Y7H6 | 1e-176 | A0A0H3Y7H6_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.N02799.1.p | 1e-108 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5250 | 24 | 35 |
Publications ? help Back to Top | |||
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