PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100072620171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 144aa MW: 15783.1 Da PI: 7.5084 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.6 | 1.7e-06 | 37 | 72 | 14 | 54 |
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++i ++++ L++l+ + +K + a++L +A+eYIk L Ote100072620171|100072620171 37 EKISERISALQQLVSPY-----GKTDTASVLLEAMEYIKFL 72 689************99.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 5.39E-8 | 21 | 76 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.3E-10 | 22 | 81 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.411 | 23 | 72 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.94E-12 | 25 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0018 | 31 | 78 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence Send to blast |
MMQHKRGPIS LDQSSFMDIM PKRIKTDAPL ASKEKKEKIS ERISALQQLV SPYGKTDTAS 60 VLLEAMEYIK FLHEQVTVLS APYLYSTSQL QDDETSSLSG KGLCLVPLSF TVGVANSNGA 120 DLWAPIKTTS KRSISDEASV ITQS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011091560.1 | 6e-78 | transcription factor bHLH113 isoform X1 | ||||
Refseq | XP_011091561.1 | 3e-78 | transcription factor bHLH113 isoform X2 | ||||
Refseq | XP_011091562.1 | 3e-78 | transcription factor bHLH113 isoform X2 | ||||
Swissprot | Q7XJU2 | 2e-49 | BH153_ARATH; Transcription factor bHLH153 | ||||
TrEMBL | A0A4D9C2D2 | 4e-81 | A0A4D9C2D2_SALSN; Uncharacterized protein | ||||
STRING | Migut.N03067.1.p | 2e-76 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10428 | 8 | 11 |
Publications ? help Back to Top | |||
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