PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100072310011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 185aa MW: 21517.6 Da PI: 9.5148 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.2 | 1.5e-44 | 4 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknr 76 +p GfrF Pt+eelv++yL++k+e+++ ++++vi+ +diy+++Pw+L+k +++e+++w+fF++r++++ +g r++r Ote100072310011|100072310011 4 VPTGFRFFPTEEELVSFYLHNKLEDDQtSSINRVIPVLDIYQLDPWHLRKycgeFCHGESEQWFFFMPRQEREVRGGRPSR 84 589********************99994566778**************9646653444778******************** PP NAM 77 atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +t+sgyWkatg+ + v+s++++++g+kk++vfykg+ap+g+kt+W m+eyr+ Ote100072310011|100072310011 85 TTASGYWKATGSPTYVYSSENKVIGVKKSMVFYKGKAPTGRKTKWKMNEYRA 136 **************************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-47 | 3 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.315 | 4 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-23 | 5 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MEEVPTGFRF FPTEEELVSF YLHNKLEDDQ TSSINRVIPV LDIYQLDPWH LRKYCGEFCH 60 GESEQWFFFM PRQEREVRGG RPSRTTASGY WKATGSPTYV YSSENKVIGV KKSMVFYKGK 120 APTGRKTKWK MNEYRAIKQD VNTSIPMLRH EMCLCRVYVV SGSLRAFDRR PTRVTVAETS 180 SASAM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swm_B | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swm_C | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swm_D | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swp_A | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swp_B | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swp_C | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
3swp_D | 8e-34 | 4 | 158 | 20 | 166 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022851387.1 | 1e-100 | NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 6e-84 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A4D9BZ26 | 1e-105 | A0A4D9BZ26_SALSN; Uncharacterized protein | ||||
STRING | Migut.N02478.1.p | 1e-100 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2494 | 23 | 57 |
Publications ? help Back to Top | |||
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