PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100071620021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 152aa MW: 17060.7 Da PI: 8.0882 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.2 | 6.6e-06 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+dCgksF+++ L H ++H Ote100071620021|100071620021 56 HKCSDCGKSFPTHQALGGHRSSH 78 79**************9999998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 5.56E-6 | 54 | 82 | No hit | No description |
PROSITE profile | PS50157 | 11.115 | 56 | 83 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 4.6E-9 | 56 | 79 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 58 | 78 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 152 aa Download sequence Send to blast |
MEEKDGSIDK KLSCKRKTRR GPLINPAILE KDKEEGEDNL PENQDSGDRV DNSDEHKCSD 60 CGKSFPTHQA LGGHRSSHNK TRLTIFNTNG SFGPVMNRRR KSXXXXXXXX XXXXXKKAST 120 SSSVAFDIDL NLPPKEDEDD VRGGRDGPIK FF |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2050 | 22 | 63 |