PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100071550022
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family CAMTA
Protein Properties Length: 1169aa    MW: 131573 Da    PI: 5.6653
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100071550022genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1168.97.6e-531082613118
                          CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg..... 77 
                                   +e ++rwl++ ei++iL+n++k+++t e+++rp++gsl+L++rk++ryfrkDG+sw+kkkdgktv+E+he+LK        
  Ote100071550022|100071550022 108 QEaQHRWLRPAEICEILQNYKKFRITPEPPNRPPNGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKASHfsyys 188
                                   5559***************************************************************************** PP

                          CG-1  78 ................................vevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                                                                   v+vl+cyYah+e n++fqrr+ywlLeee+++ivlvhy+evk
  Ote100071550022|100071550022 189 mnlsslglhclvkdviitkmtylvvyifqagsVDVLHCYYAHGEGNENFQRRSYWLLEEEMSHIVLVHYREVK 261
                                   **********************************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143777.71103266IPR005559CG-1 DNA-binding domain
SMARTSM010763.1E-65106261IPR005559CG-1 DNA-binding domain
PfamPF038596.3E-29109183IPR005559CG-1 DNA-binding domain
PfamPF038592.2E-13217259IPR005559CG-1 DNA-binding domain
CDDcd002045.05E-16771883No hitNo description
Gene3DG3DSA:1.25.40.203.7E-19773887IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029720.367774895IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.42E-19776885IPR020683Ankyrin repeat-containing domain
PfamPF127967.4E-9796886IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.446824856IPR002110Ankyrin repeat
SMARTSM002481.7E-4824853IPR002110Ankyrin repeat
SMARTSM0024873863892IPR002110Ankyrin repeat
SuperFamilySSF525405.31E-89891046IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM00015219951017IPR000048IQ motif, EF-hand binding site
PfamPF006120.0889971016IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.3099971025IPR000048IQ motif, EF-hand binding site
SMARTSM000150.001610181040IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.81610191043IPR000048IQ motif, EF-hand binding site
PfamPF006129.4E-510211040IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1169 aa     Download sequence    Send to blast
HTPFSSIFLT VELFPYFFHF PSSYFFSTSI SIFSTFIHPC QHYLFLYSLR ARCIFYSNWG  60
TVLVLTPIWK RVSRVWTGFI NQLLFGAVMA ESRRYALNAQ LDIDQILQEA QHRWLRPAEI  120
CEILQNYKKF RITPEPPNRP PNGSLFLFDR KVLRYFRKDG HSWRKKKDGK TVKEAHERLK  180
ASHFSYYSMN LSSLGLHCLV KDVIITKMTY LVVYIFQAGS VDVLHCYYAH GEGNENFQRR  240
SYWLLEEEMS HIVLVHYREV KGNRTNFNHI RDADSIPSSR QNEDVLSSDA DSSAASRFQS  300
YDYQRASPIT DTTSLNSTLA SDLEDAESGN YQGQSSGIPG MSFGHTTRGE ENRSPMDSGL  360
TYDFQQDIGF PSWGSVAESS SASYQSVDFQ LLPPSTQSSP MATMPLQDNE LLDHVFSGAF  420
GKKQELGNHS DGLGEWQAPD HGSLHAPKWS TDQKSDGNLN LGQNLNHPPL RQPLLYDLAT  480
KLNDANQVDL SDSMGLHNTY LTDQNGQPLE IDLQIQALGS GGSSLKSELD GNLNAGDKTN  540
NPAPRKPLLD GVMREGLKKL DSFDRWISKE LDDVTESTMQ SDSGVYWETV GGGDVDDSSI  600
STQVPSDSYV LGPSLAQDQL FSIIDFSPNW AYSGSEIKLL IMGRFLRSQE VADYKWACMF  660
GELEVPAEVV GDGILRSCSE VREFEFRTSS VEDVDSDETR LRMRFGKLLS LGSSIQQTSV  720
QVIDEETYQL YTKISALLKD DTEWEEMLSV TNKVEDQADQ LLQKLLKEKL HNWLLQKITE  780
DGKGPNVLDE EGLGVLHFAA ALGYDWAIPP TIAAGVSVNF RDVNGWTALH WAAFYGREHT  840
VAFLISIGAS PGALTDPTPM YPSGETPADL AASNGHKGIA GYLAESSLSS HLSSLDLKVS  900
EQSGYTEKAV ETVSERIATP VGAGDLPHGL SMKDSLAAVR NATQAAARIH QVFRVQSFQR  960
KQLTEYGDNE YGISDERALS LLALKTNKAG QHDEPVHAAA VRIQNKFRSW KGRKDFLLIR  1020
RQIIKIQAHV RGHQVRKNYK KIIWSVGILD KVILRWRRKG RGLSGFKSEA HAASSSMIET  1080
ETKEDEYDFL KEGRKQSEER LQKALARVKS MVQYPEARDQ YRRLLNVVSE MQEKKAAQEM  1140
MLNNPEVDFD EDLIEFEALL DDDSYLPIT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097567.10.0calmodulin-binding transcription activator 1-like
RefseqXP_011097568.10.0calmodulin-binding transcription activator 1-like
TrEMBLA0A4D8Z7070.0A0A4D8Z707_SALSN; Uncharacterized protein
STRINGMigut.L00134.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146