PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100071510191 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 154aa MW: 17061.1 Da PI: 4.3276 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.2 | 0.00033 | 13 | 43 | 25 | 54 |
CTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 25 ellPk.askapskKlsKaeiLekAveYIksL 54 + l + +s+++s+ ++Ka+i+ A +YI +L Ote100071510191|100071510191 13 QKLEQlRSATNSTSVNKASIVVDASRYIEEL 43 44444344569999**************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 2.0E-4 | 24 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS51671 | 8.658 | 80 | 152 | IPR002912 | ACT domain |
CDD | cd04873 | 2.31E-4 | 89 | 145 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008152 | Biological Process | metabolic process | ||||
GO:0016597 | Molecular Function | amino acid binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence Send to blast |
MSSRNKKKEA LYQKLEQLRS ATNSTSVNKA SIVVDASRYI EELKDKVETL NQDVASIQSS 60 TRRDSLPAVK VETLEKGFLI NVLSEKNCPG LLVSILEAFE ELGLDVLDAR VSCSDNFRLE 120 AVGENEGQSD SIDAQVIKQA VLQAISNWQD EQDD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028120874.1 | 2e-76 | transcription factor SCREAM2-like isoform X2 | ||||
TrEMBL | A0A2G9HE70 | 1e-84 | A0A2G9HE70_9LAMI; Uncharacterized protein | ||||
STRING | VIT_08s0058g00960.t01 | 3e-73 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2945 | 9 | 11 |