PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100070460001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 27488.1 Da PI: 6.5178 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.2 | 3e-27 | 2 | 68 | 54 | 121 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121 +e+ewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ ++ lvg+kktLvfy+grapkgekt+W Ote100070460001|100070460001 2 GEREWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-GSVLVGMKKTLVFYRGRAPKGEKTNW 68 578**************************************.************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 28.167 | 1 | 107 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.02E-30 | 2 | 79 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-9 | 6 | 68 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MGEREWYFFS LRDRKYPTGL RTNRATEAGY WKTTGKDKEI FRGSVLVGMK KTLVFYRGRA 60 PKGEKTNWEE WVVCRVFQKS TTVKRPQQTA SSPPSQADES ACDTNALVNE LGDIELPNFS 120 SNSMALSAPS TNAALQNXXX XXXTDASIMN WNTAATDAVN SITWPLLSTN LSMNSLLLTA 180 LQLRGHSAAA ADNYSLMSHT TDMMNPFGNG GGGDNHDFTS THFNMASTSS LPQPPSTEQP 240 PYNVDSNIW |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-26 | 1 | 85 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-26 | 1 | 85 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-26 | 1 | 85 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-26 | 1 | 85 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
4dul_A | 7e-26 | 1 | 85 | 68 | 171 | NAC domain-containing protein 19 |
4dul_B | 7e-26 | 1 | 85 | 68 | 171 | NAC domain-containing protein 19 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096994.1 | 1e-100 | NAC domain-containing protein 92 | ||||
TrEMBL | A0A2G9HGW4 | 4e-98 | A0A2G9HGW4_9LAMI; Uncharacterized protein | ||||
STRING | EOY21031 | 2e-76 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA152 | 24 | 279 |