PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100069700071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | FAR1 | ||||||||
Protein Properties | Length: 251aa MW: 28219.9 Da PI: 6.3166 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 78.2 | 1.6e-24 | 65 | 153 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y++YA+ +GF+vr+ k+++ +++i ++t++Cskeg ++++ ++ ++ +++etrtgCka++ +++g+w+v++++ Ote100069700071|100069700071 65 LYCDYATAMGFNVRRGKQYYFMGTKRIRSKTYCCSKEGVKDDKADN-NSVGYKKPETRTGCKAMISFICDDSGQWKVSRFV 144 69****************************************9999.899999**************************** PP FAR1 83 leHnHelap 91 +eHnH++ap Ote100069700071|100069700071 145 KEHNHDMAP 153 *****9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.6E-21 | 65 | 153 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MENTGFELVP HEAACGDSDE EGVALPRSVG EVVDVNEGQD EGHIVELEKK LLEQVVYSEE 60 EAYMLYCDYA TAMGFNVRRG KQYYFMGTKR IRSKTYCCSK EGVKDDKADN NSVGYKKPET 120 RTGCKAMISF ICDDSGQWKV SRFVKEHNHD MAPSYAKPSV KSGQAILAAN VYGNGVALES 180 LSEHDKIREL SLQLAIAKNR AETSEKLAAT YKRQLHMIVG HIEEHNQFLS KKVQKVLNNV 240 KELESEDLKK L |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012846482.1 | 1e-156 | PREDICTED: protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A4D8YWH6 | 1e-163 | A0A4D8YWH6_SALSN; Uncharacterized protein | ||||
STRING | Migut.J01148.1.p | 1e-155 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14517 | 7 | 9 |