PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100067690031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | C2H2 | ||||||||
Protein Properties | Length: 140aa MW: 16112.2 Da PI: 8.5032 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15 | 7.2e-05 | 30 | 52 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H Ote100067690031|100067690031 30 YSCTFCRREFRSAQALGGHMNVH 52 99*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.59E-6 | 27 | 56 | No hit | No description |
Gene3D | G3DSA:3.30.160.60 | 6.3E-4 | 28 | 55 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
PROSITE profile | PS50157 | 11.157 | 30 | 57 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.9E-5 | 30 | 53 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 32 | 52 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MHREFPPTKK YYFQPPPFFQ DSLVWPPRSY SCTFCRREFR SAQALGGHMN VHRRDRARLK 60 HSPPPLQSQL QESSAAAGNP SIINTHPSRR RSDGGEEREC DMDEDDFVCK RHKLCSSISM 120 EEIDLELRLG VPAVKLGQIS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1njq_A | 3e-13 | 25 | 52 | 2 | 29 | superman protein |
2l1o_A | 3e-13 | 25 | 52 | 2 | 29 | Transcriptional regulator SUPERMAN |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may regulate cell division and growth. {ECO:0000269|PubMed:12154136}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858108.1 | 9e-24 | PREDICTED: transcriptional regulator SUPERMAN-like | ||||
Refseq | XP_018810737.1 | 6e-24 | PREDICTED: transcriptional regulator SUPERMAN-like isoform X2 | ||||
Swissprot | O80942 | 3e-18 | ZFP10_ARATH; Zinc finger protein 10 | ||||
TrEMBL | A0A4D8ZQA4 | 1e-36 | A0A4D8ZQA4_SALSN; Uncharacterized protein | ||||
STRING | Migut.F00753.1.p | 3e-23 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2110 | 24 | 53 |