PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100067080011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 286aa MW: 32933.8 Da PI: 6.6248 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.9 | 6.8e-52 | 10 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrF P+deelv++yL+kk+++++++ ++ e+d++ +ePw+Lp +k +++ewyfFs rd+kyatg r+nrat+sg Ote100067080011|100067080011 10 LPPGFRFYPSDEELVCHYLHKKIANEETDRRGTLVEIDLHICEPWQLPDVAKLNSNEWYFFSFRDRKYATGYRTNRATNSG 90 79*************************999999***************87778899************************* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 yWkatgkd++v++ ++++vg++ktLvfyk+rap+g+kt W+mhe+rle Ote100067080011|100067080011 91 YWKATGKDRNVVDPvSRAVVGMRKTLVFYKNRAPNGVKTGWIMHEFRLE 139 *************988889***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-61 | 8 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.306 | 10 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.9E-28 | 11 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MGLRDIGCTL PPGFRFYPSD EELVCHYLHK KIANEETDRR GTLVEIDLHI CEPWQLPDVA 60 KLNSNEWYFF SFRDRKYATG YRTNRATNSG YWKATGKDRN VVDPVSRAVV GMRKTLVFYK 120 NRAPNGVKTG WIMHEFRLED PHMPPKEDWV LCRVFYKSRG ESSNNFIPEN LYDLHTTGDT 180 SPNLGSSPTN IEPNHHQNMI TPSFNEGRNP SSSSGLLPLH FHIYHEECNK NVVSRPSTSN 240 HGHKLVESKC EEDYGFLFDM SLDYSTGVAS YLEDVRFDHD SSSIFI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-46 | 9 | 158 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-46 | 9 | 158 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-46 | 9 | 158 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-46 | 9 | 158 | 16 | 166 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-46 | 9 | 158 | 16 | 166 | NAC domain-containing protein 19 |
4dul_B | 2e-46 | 9 | 158 | 16 | 166 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022874530.1 | 1e-123 | protein CUP-SHAPED COTYLEDON 3-like | ||||
Swissprot | Q84TE6 | 4e-58 | NAC22_ARATH; NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A2G9HEI9 | 1e-124 | A0A2G9HEI9_9LAMI; Uncharacterized protein | ||||
STRING | EOX94424 | 1e-115 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1882 | 24 | 66 |