PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100066250021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bZIP | ||||||||
Protein Properties | Length: 197aa MW: 22264.9 Da PI: 8.9966 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 26.1 | 1.9e-08 | 27 | 81 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvke..LeaeNkaLkkeleelkkeva 57 kr++r NR +A rs +RK +i eLe+k ++ L++eN++Lk +l+ ++++++ Ote100066250021|100066250021 27 KRAKRILANRQSAARSKERKARYISELERKRDTtgLSNENTELKLRLQAMEQQAQ 81 9*****************************98766**************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-7 | 23 | 89 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.0E-7 | 27 | 86 | No hit | No description |
SuperFamily | SSF57959 | 6.25E-7 | 27 | 79 | No hit | No description |
Pfam | PF00170 | 1.1E-6 | 27 | 84 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.11E-16 | 28 | 79 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MLNESSIEAK KAMPPDKLAE LWTLDPKRAK RILANRQSAA RSKERKARYI SELERKRDTT 60 GLSNENTELK LRLQAMEQQA QLRDALNEAL RQEVERLRVA TGEISTTSDT FNLTMQHLPY 120 NQATFFSNQP QAASNESQMQ QQQQFHSLPA GMSNHPMLDS MHHDPLGRFQ GLDISSRPTH 180 VKSEGPSISA SESSSTF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor probably involved in vascular development and shoot tissue organization. Binds to the DNA sequence 5'-CCGAGTGTGCCCCTGG-3' present in the promoter region Box II of the phloem-specific rice tungro bacilliform virus (RTBV) promoter. May regulate tissue-specific expression of the RTBV promoter and virus replication. {ECO:0000269|PubMed:14704272}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00129 | DAP | Transfer from AT1G06850 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076587.1 | 1e-102 | transcription factor RF2b | ||||
Swissprot | Q6S4P4 | 2e-64 | RF2B_ORYSJ; Transcription factor RF2b | ||||
TrEMBL | A0A4D9C510 | 1e-106 | A0A4D9C510_SALSN; Uncharacterized protein | ||||
STRING | Migut.F00604.1.p | 6e-89 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3425 | 23 | 49 |
Publications ? help Back to Top | |||
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