PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100066230061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 605aa    MW: 67130.9 Da    PI: 8.3036
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100066230061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.33e-07472519448
                                   S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                                   WT  E  +l+d+v ++G g W++I + +     +Rt  ++k++w+++l
  Ote100066230061|100066230061 472 WTISEVGKLIDGVSEFGVGKWSRIKKLFFsasAHRTSVDLKDKWRNLL 519
                                   9999999***************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.946464523IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.6E-12465521IPR009057Homeodomain-like
SuperFamilySSF466893.43E-15466521IPR009057Homeodomain-like
SMARTSM007178.3E-7468521IPR001005SANT/Myb domain
CDDcd116605.53E-19472520No hitNo description
PfamPF139213.6E-5472521No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MENGHPSIGL EDGTIDVERL LVEPQDEHLS MDSVISFNEK IPKSLMSAED VSRSSGGLDT  60
GIAQEGKDIL NGEVLNAMPS EVQVGYFRLE NDLCSMGEEY LLESITNLDY GSSEGLHASA  120
SDSQVQVFTA VSDTECRSDL FRTDNLRECQ IDLFNVGSSK LSDTPHHHEC ETLSGQNPAT  180
SPGSCTLQNS VKSQNSSSSS CQDVLSDEND GRFSQAGEMF CSSNTERSND TELTVQDGAT  240
GVIKLEETLI TSVQVSSTDI LPTQKRSRKP TQRYICELAD PVGTYPKRRR EVSSSSIKGK  300
SLGVKNHKSQ IMGPKAVRES PEEFSVIAIQ VPFGSLANKE GSDRHAHNIV PHVDCRNSNT  360
KSKGKFVSLQ DQSKRENCIT AVDLKKRSDC IRGQRKTEVC FMEGQVKKKY VHATATNLKK  420
RNECNIGVIG KKRDNCFAAD CRRAMHQKMR DGSLTSESSE ETSGRRKHHR LWTISEVGKL  480
IDGVSEFGVG KWSRIKKLFF SASAHRTSVD LKDKWRNLLK ASGVLEQGNQ QGGKKRNMAW  540
RPLPKSILRR VCELAAMYPY PKGNNKKKKT PNISCDALDT STDMTLTRYR RILXXXXXXX  600
XXXGN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011077333.10.0uncharacterized protein LOC105161373 isoform X1
TrEMBLA0A4D8ZZS30.0A0A4D8ZZS3_SALSN; Uncharacterized protein
STRINGMigut.L01689.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723