PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100064060071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | FAR1 | ||||||||
Protein Properties | Length: 127aa MW: 15093.5 Da PI: 10.0115 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.3 | 2.5e-13 | 5 | 48 | 48 | 91 |
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +ek r+r+etr+gC+a++ v+k ++gkw vtk+++eH+H+l+p Ote100064060071|100064060071 5 REKIVRQRVETRVGCRAMILVRKISSGKWTVTKFVKEHTHPLTP 48 367889***********************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 2.0E-10 | 6 | 48 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
MPDKREKIVR QRVETRVGCR AMILVRKISS GKWTVTKFVK EHTHPLTPGK GQKDLIYDQY 60 PNEHDKIREL LHQLAIEKKK VAAYKRHLEM VLDQIEEHNQ SLGKKIEDIM NSVRDMESKE 120 QLDPRFY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011098324.1 | 2e-75 | protein FAR1-RELATED SEQUENCE 5 | ||||
TrEMBL | A0A4D9BF96 | 7e-75 | A0A4D9BF96_SALSN; Uncharacterized protein | ||||
STRING | Migut.H01929.1.p | 2e-68 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11568 | 23 | 25 |