PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100063370101 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | SRS | ||||||||
Protein Properties | Length: 145aa MW: 14975.6 Da PI: 3.8465 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 54.8 | 3.6e-17 | 32 | 66 | 120 | 154 |
DUF702 120 vssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 vs++dd+e+++aYqtav+i+GhvfkGiLydqG+e+ Ote100063370101|100063370101 32 VSAIDDAEDQYAYQTAVNISGHVFKGILYDQGTES 66 89******************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01624 | 4.2E-18 | 32 | 63 | IPR006511 | Lateral Root Primordium type 1, C-terminal |
Pfam | PF05142 | 1.1E-14 | 32 | 65 | IPR007818 | Protein of unknown function DUF702 |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence Send to blast |
MRSSGGGGIS CQDCGNXXXX XLLTYAVPDL LVSAIDDAED QYAYQTAVNI SGHVFKGILY 60 DQGTESQYAA AGETSSGGGS VSVGVQQLNL ITGXXXXXXX XXXXXXXXGG GGGGGSPSPY 120 LDPSLFPAPL NSFMAGTQFF PPPRS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011090405.1 | 2e-37 | protein SHI RELATED SEQUENCE 1-like | ||||
Swissprot | K4B6C9 | 2e-27 | EOT1_SOLLC; Protein EXPRESSION OF TERPENOIDS 1 | ||||
TrEMBL | A0A4D9AWL5 | 6e-40 | A0A4D9AWL5_SALSN; Uncharacterized protein | ||||
STRING | EOX90942 | 4e-30 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18294 | 2 | 4 |
Publications ? help Back to Top | |||
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