PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100061800021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 218aa MW: 24380 Da PI: 6.7368 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.9 | 4.1e-09 | 108 | 165 | 6 | 45 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...................TTS-.STCHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.as................kapskK.lsKaeiLe 45 ++ErrRR+r+N++++ Lr+++Pk + +a+++ ls +++Le Ote100061800021|100061800021 108 LMAERRRRKRLNDRLSMLRSVVPKiSKfeverrnpdtrieiwcSAKAGLlLSTVTTLE 165 589*********************5558888877777777777666666677777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.553 | 102 | 167 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.93E-7 | 105 | 132 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.8E-7 | 108 | 131 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-6 | 108 | 165 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 0.00815 | 144 | 185 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.8E-7 | 188 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MEFYTNQEFN LDYFPTTTCF DPPLFGCSSF GHDLSPPAFA VDSSAFNQTL PYLPVLHDEP 60 PFANGLEIGP PCKPEPIFEA VPTFNVGSQI EIRKSKVKKL NGQPSKNLMA ERRRRKRLND 120 RLSMLRSVVP KISKFEVERR NPDTRIEIWC SAKAGLLLST VTTLEALGLE IEHCVISCFN 180 DFALQASCSQ DLKKMSVLDS EDIKQALLRN AGYGGSCL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019438466.1 | 9e-62 | PREDICTED: transcription factor bHLH93-like isoform X3 | ||||
Swissprot | Q9LSL1 | 6e-39 | BH093_ARATH; Transcription factor bHLH93 | ||||
TrEMBL | A0A4D9BCW2 | 3e-62 | A0A4D9BCW2_SALSN; Uncharacterized protein | ||||
STRING | XP_002527339.1 | 4e-53 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA789 | 24 | 97 |
Publications ? help Back to Top | |||
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