PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100059540021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 102aa MW: 10810.2 Da PI: 10.0097 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.4e-16 | 14 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +ykG+r++k +g+Wv+eIr+p g + r +lg++ tae Aa a++ a +l+g Ote100059540021|100059540021 14 KYKGIRRRK-WGKWVSEIRVP---G-TpERLWLGSYATAEAAAVAHDVAFYCLRG 63 8*****998.**********8...3.69*********************999997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.94E-16 | 14 | 73 | No hit | No description |
SMART | SM00380 | 4.4E-28 | 14 | 79 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.6E-26 | 14 | 73 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.4E-9 | 14 | 63 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-18 | 14 | 71 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 21.391 | 14 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.1E-9 | 15 | 26 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.1E-9 | 37 | 53 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MSSSSEESST AAGKYKGIRR RKWGKWVSEI RVPGTPERLW LGSYATAEAA AVAHDVAFYC 60 LRGDSSPQNL NFPLVLPAGA RAGMSPRSVQ KAASDAGLAI DA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854922.1 | 3e-59 | PREDICTED: ethylene-responsive transcription factor ERF020 | ||||
Swissprot | Q9C9I8 | 4e-41 | ERF20_ARATH; Ethylene-responsive transcription factor ERF020 | ||||
TrEMBL | A0A022Q295 | 6e-58 | A0A022Q295_ERYGU; Uncharacterized protein | ||||
STRING | Migut.C01360.1.p | 1e-58 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9494 | 20 | 28 |
Publications ? help Back to Top | |||
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