PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100058770071
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 394aa    MW: 43878.1 Da    PI: 7.3941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100058770071genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11279324655
                                   HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   +++Er RR+ri + + +L++l P+     +k  + ae+L +AveYIk+Lq
  Ote100058770071|100058770071 279 SIAERMRRSRISKNMKKLQDLFPNM----DKQTNTAEMLDLAVEYIKDLQ 324
                                   689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.878273323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.18E-14276333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.34E-12277328No hitNo description
Gene3DG3DSA:4.10.280.102.1E-14278333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-8279324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-11279329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MDSDFFGNHR HHHHQQQSSG LARHQSAPSS FLAAILDSNT DNSSGDESDA FFTALMDAPG  60
DLYPKSNGDN QISCGVKRER XXXXXXXXXS AQIGGYDNGI GSYYVGMERD GNGNRSNILA  120
RQSSSPAGFF NGYGIMGEVG EYRAHDQTEN SSSGGGLSSP MNLSSCSSRF MPSIPETGNE  180
NGRLRNGDYE AVFHHDSWNE PQFNNLKRNR DAADLNMFSG LENQNGETRK KSNGLVSHFS  240
LPKTSTEMAV VENLLQFQPE TTVPCQIRAK RGFATHPRSI AERMRRSRIS KNMKKLQDLF  300
PNMDKQTNTA EMLDLAVEYI KDLQKQVQTL QDSAASGAIN TGNRQHFEGS TASFSWWNWE  360
RMNSRRAQKY VLPQTQGSLY FTAPPQLPCK PQPS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087339.11e-122transcription factor bHLH130
TrEMBLA0A0H3Y8V81e-139A0A0H3Y8V8_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.B01333.1.p2e-92(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238