PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100058770071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 394aa MW: 43878.1 Da PI: 7.3941 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.3e-11 | 279 | 324 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR+ri + + +L++l P+ +k + ae+L +AveYIk+Lq Ote100058770071|100058770071 279 SIAERMRRSRISKNMKKLQDLFPNM----DKQTNTAEMLDLAVEYIKDLQ 324 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.878 | 273 | 323 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.18E-14 | 276 | 333 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.34E-12 | 277 | 328 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.1E-14 | 278 | 333 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.7E-8 | 279 | 324 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.8E-11 | 279 | 329 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence Send to blast |
MDSDFFGNHR HHHHQQQSSG LARHQSAPSS FLAAILDSNT DNSSGDESDA FFTALMDAPG 60 DLYPKSNGDN QISCGVKRER XXXXXXXXXS AQIGGYDNGI GSYYVGMERD GNGNRSNILA 120 RQSSSPAGFF NGYGIMGEVG EYRAHDQTEN SSSGGGLSSP MNLSSCSSRF MPSIPETGNE 180 NGRLRNGDYE AVFHHDSWNE PQFNNLKRNR DAADLNMFSG LENQNGETRK KSNGLVSHFS 240 LPKTSTEMAV VENLLQFQPE TTVPCQIRAK RGFATHPRSI AERMRRSRIS KNMKKLQDLF 300 PNMDKQTNTA EMLDLAVEYI KDLQKQVQTL QDSAASGAIN TGNRQHFEGS TASFSWWNWE 360 RMNSRRAQKY VLPQTQGSLY FTAPPQLPCK PQPS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011087339.1 | 1e-122 | transcription factor bHLH130 | ||||
TrEMBL | A0A0H3Y8V8 | 1e-139 | A0A0H3Y8V8_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.B01333.1.p | 2e-92 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4435 | 22 | 38 |