PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100058150041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NF-YA | ||||||||
Protein Properties | Length: 230aa MW: 25877.1 Da PI: 5.9377 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 41.8 | 3.6e-13 | 160 | 182 | 36 | 58 |
CBFB_NFYA 36 kpylheSRhkhAlrRpRgsgGrF 58 pylheSRh+hA+rR+RgsgGrF Ote100058150041|100058150041 160 MPYLHESRHQHAIRRERGSGGRF 182 69********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00521 | 4.4E-5 | 124 | 185 | IPR001289 | Nuclear transcription factor Y subunit A |
Pfam | PF02045 | 7.5E-11 | 160 | 182 | IPR001289 | Nuclear transcription factor Y subunit A |
PROSITE profile | PS51152 | 14.151 | 161 | 185 | IPR001289 | Nuclear transcription factor Y subunit A |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MQSKPETVNQ EETDTYITLN STMRSEPWWT MRGSASDSSS AEQSGDDRSQ SESNDTAKHS 60 LNNTPLLQDK DYRPEDVHLQ HVEPASHPRV DGSLVQPVPL ELVGHSIACA SNPYDPYYGG 120 MMAAYGQPMV PHLYDMHHMR MPLPLEMAQE PVYXXXXXXM PYLHESRHQH AIRRERGSGG 180 RFAKKSDAST SKEAEYQKSQ SGQTGEVPAS QQRELLRSNY APALQPEARP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012844659.1 | 3e-83 | PREDICTED: nuclear transcription factor Y subunit A-1 | ||||
Refseq | XP_012844660.1 | 3e-83 | PREDICTED: nuclear transcription factor Y subunit A-1 | ||||
TrEMBL | A0A022QUU7 | 3e-72 | A0A022QUU7_ERYGU; Uncharacterized protein | ||||
TrEMBL | A5PGU3 | 7e-72 | A5PGU3_ANTMA; YA4 | ||||
STRING | Migut.N02320.1.p | 1e-82 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3111 | 22 | 48 |