PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100051220061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

Nin-like

Protein Properties

Length: 910aa MW: 101971 Da PI: 6.1502

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100051220061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.2e-29	545	596	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++++kyFs+++kdAA+++gvc+T+LKriCRqyGI+RWP+Rki+++ Ote100051220061\|100051220061 545 AEKHVSLSVIQKYFSGSLKDAARNIGVCPTTLKRICRQYGIPRWPSRKINKV 596 5899**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.95	535	616	IPR003035	RWP-RK domain
Pfam	PF02042	1.8E-24	549	596	IPR003035	RWP-RK domain
SuperFamily	SSF54277	3.24E-21	803	894	No hit	No description
SMART	SM00666	8.4E-19	810	890	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	4.9E-21	810	888	No hit	No description
PROSITE profile	PS51745	19.707	810	892	IPR000270	PB1 domain
Pfam	PF00564	8.0E-17	811	887	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 910 aa Download sequence Send to blast
MEYTPRGWME GMDLAHAENG VSAMNLDNSF NNVAELMNFD AYSRWSDNPN NLVDQSIPSF 60 VLSPPRGEVV LSLGENKLTC STNSVDLIKF RDNNQSQHYV VADVAKTVVP RPLMEPLTER 120 MLKALHLLKE WSTEGILAQV WVPLKIGDEY ILSTSEQPYM LDHQLSGYRE VSKLFTFSTE 180 SKLGSFPGLP GRVFTSRIPE WTSNVMYYNK AEYLRIKYAT DHEVRGSIAL PVFEDDSLES 240 SCCAVLELVT TTEKSNFDLE MENVCRALEA VHLRSKVSPK LYPQTLSIDQ RAALVEITDV 300 LRVVCHTHQL PLALTWIPCS YIEDVGDQTM RWRVHDAGVN RKCVLCIEDT ACYAHDKNME 360 SFVHACAEHY LEEGQGIAGK ALQSNHPFFF PDVKEYHVSD YPLVHHARKF GLNAAIAIRL 420 RSIYTGDNDY ILEFFLPLNM KGSVEHEMLL NNLSITMQRI CKSLRTVLDS ELLKIDTNTI 480 LVDNIVETQP ARTIRKVYEQ SLIDEGSTYV NGPTENASEL IGTECSHEQL IAGPKKQTEK 540 KRNTAEKHVS LSVIQKYFSG SLKDAARNIG VCPTTLKRIC RQYGIPRWPS RKINKVTRSL 600 KKIQSVLNSV EGVEGGLRFD PTTGGVVTTK SPILQELDHR STVFPTKIPL IENSVSSCVG 660 IEMARVKMEE ACLLDGNQEA CINLEGMKSC KGEHKINSAS FRSYDSKLAA IEARLSTYAT 720 TPDTRKRTKW EACEPLFTSS NERESKLKNV AMIDKDVGVE HSQRTSSGMT DSSSGSGTGS 780 MMKGSSSSSP SFRRRQNLVT EASCDNVDPK VTVKATYKED TIRFKFEPTA RCIQLYEVVA 840 ERFNLQTGQF QLKYVDDEEE WVLLVSDSDL LECLEISEFL GRRSVKIMAR DMPSSSGSSS 900 ASSDFLGGAS

Sequence ? help Back to Top

Protein Sequence Length: 910 aa Download sequence Send to blast

MEYTPRGWME GMDLAHAENG VSAMNLDNSF NNVAELMNFD AYSRWSDNPN NLVDQSIPSF  60
VLSPPRGEVV LSLGENKLTC STNSVDLIKF RDNNQSQHYV VADVAKTVVP RPLMEPLTER  120
MLKALHLLKE WSTEGILAQV WVPLKIGDEY ILSTSEQPYM LDHQLSGYRE VSKLFTFSTE  180
SKLGSFPGLP GRVFTSRIPE WTSNVMYYNK AEYLRIKYAT DHEVRGSIAL PVFEDDSLES  240
SCCAVLELVT TTEKSNFDLE MENVCRALEA VHLRSKVSPK LYPQTLSIDQ RAALVEITDV  300
LRVVCHTHQL PLALTWIPCS YIEDVGDQTM RWRVHDAGVN RKCVLCIEDT ACYAHDKNME  360
SFVHACAEHY LEEGQGIAGK ALQSNHPFFF PDVKEYHVSD YPLVHHARKF GLNAAIAIRL  420
RSIYTGDNDY ILEFFLPLNM KGSVEHEMLL NNLSITMQRI CKSLRTVLDS ELLKIDTNTI  480
LVDNIVETQP ARTIRKVYEQ SLIDEGSTYV NGPTENASEL IGTECSHEQL IAGPKKQTEK  540
KRNTAEKHVS LSVIQKYFSG SLKDAARNIG VCPTTLKRIC RQYGIPRWPS RKINKVTRSL  600
KKIQSVLNSV EGVEGGLRFD PTTGGVVTTK SPILQELDHR STVFPTKIPL IENSVSSCVG  660
IEMARVKMEE ACLLDGNQEA CINLEGMKSC KGEHKINSAS FRSYDSKLAA IEARLSTYAT  720
TPDTRKRTKW EACEPLFTSS NERESKLKNV AMIDKDVGVE HSQRTSSGMT DSSSGSGTGS  780
MMKGSSSSSP SFRRRQNLVT EASCDNVDPK VTVKATYKED TIRFKFEPTA RCIQLYEVVA  840
ERFNLQTGQF QLKYVDDEEE WVLLVSDSDL LECLEISEFL GRRSVKIMAR DMPSSSGSSS  900
ASSDFLGGAS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011073897.1	0.0	protein NLP9
TrEMBL	A0A2G9GDZ0	0.0	A0A2G9GDZ0_9LAMI; Uncharacterized protein
STRING	XP_009588830.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3981	24	45