PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100047690051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 29453 Da PI: 9.4497 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.3 | 1.8e-29 | 131 | 187 | 2 | 57 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--S CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHn 57 +D ++WrKYGqK++kgs++pr+YYrC+++ gC+++k+ver+++dp+++++tY+g+H Ote100047690051|100047690051 131 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCMARKQVERNRSDPNMFIVTYSGDHX 187 79************************9988**************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-28 | 119 | 187 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.766 | 125 | 191 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.02E-25 | 125 | 188 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.1E-33 | 130 | 190 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.7E-25 | 132 | 186 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MEDDWDLHAV VRSCXXXXXX XXXXXXXXXT AIPSSRDLSS SERDCNFSWF KDPFEARKSR 60 SVEDLHELWK PFFPKQQISP NSPKQKQQPF SLISGSNSKP SSSSHHPTPR SKKRKHHSKK 120 VCHVAAENLS SDMWSWRKYG QKPIKGSPYP RGYYRCSTSK GCMARKQVER NRSDPNMFIV 180 TYSGDHXXXX XXXXXXXXHR NSLAGCSRQK QSPPPTPQKS SSDEDADDFF AGLEDFASES 240 EPLQFPWMSS NAAATAAGGG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-17 | 119 | 186 | 6 | 74 | Disease resistance protein RRS1 |
5w3x_D | 2e-17 | 119 | 186 | 6 | 74 | Disease resistance protein RRS1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters. {ECO:0000269|PubMed:11875555}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced after flagellin treatment. {ECO:0000269|PubMed:11875555}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011092990.1 | 2e-73 | WRKY transcription factor 22 | ||||
Swissprot | O04609 | 8e-61 | WRK22_ARATH; WRKY transcription factor 22 | ||||
TrEMBL | A0A0D5Y9Z1 | 3e-89 | A0A0D5Y9Z1_SALMI; WRKY protein | ||||
STRING | XP_009758175.1 | 9e-67 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2591 | 24 | 57 |