PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100044030011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 350aa MW: 39874.1 Da PI: 7.0074 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 175.2 | 1.8e-54 | 28 | 154 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 +ppGfrFhPtd+e++++yL kkv+++++++ +i e+d++k+ePwdLp+k+k +e+ew+fF+++++ky++g r+nrat+sg Ote100044030011|100044030011 28 MPPGFRFHPTDSEIIDHYLLKKVKDRRFRA-VAIGEIDLNKCEPWDLPQKAKMGENEWFFFFEKESKYPSGMRTNRATASG 107 79*************************999.67***************99999**************************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatgkdke++++k+ lvg+kktLvfykgrapkgektdWv+heyrl Ote100044030011|100044030011 108 YWKATGKDKEIYREKKLLVGMKKTLVFYKGRAPKGEKTDWVIHEYRL 154 *************9999****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.8E-58 | 24 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.419 | 28 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.2E-27 | 29 | 154 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence Send to blast |
MEGVNYNEEG GGGYYDELAI ESSVVDKMPP GFRFHPTDSE IIDHYLLKKV KDRRFRAVAI 60 GEIDLNKCEP WDLPQKAKMG ENEWFFFFEK ESKYPSGMRT NRATASGYWK ATGKDKEIYR 120 EKKLLVGMKK TLVFYKGRAP KGEKTDWVIH EYRLHAKEKW VVCKVFNKKN DVRTNPAGVQ 180 LARIDSFPDS FILDSPTSLP PLSYDYEKPS SSYAAHDFKP TTTLMLSNDN ALQDGHNHFL 240 FPNIMINSFS APQMVHLNSV FPHQPPSLVH QHQDGPMMGR DATNLIPIKR TDHNPNSRIG 300 AHKAGKEPDR MGKVEETEIN GSERNMQCDE VLVESLGFSP SVSDLDSLWS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-50 | 28 | 171 | 15 | 171 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that acts as positive regulator of leaf senescence. Activates NYC1, SGR1, SGR2 and PAO, which are genes involved in chlorophyll catabolic processes. Activates senescence-associated genes, such as RNS1, SAG12 and SAG13. {ECO:0000269|PubMed:27021284}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078584.1 | 1e-104 | NAC domain-containing protein 92 | ||||
Swissprot | Q9SQQ6 | 6e-75 | NAC46_ARATH; NAC domain-containing protein 46 | ||||
TrEMBL | A0A2G9GVZ8 | 9e-85 | A0A2G9GVZ8_9LAMI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA152 | 24 | 279 |
Publications ? help Back to Top | |||
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