PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100042030081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 631aa MW: 70804.6 Da PI: 8.1865 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26 | 2.1e-08 | 506 | 553 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E ++l+d+v +G g+W++I + + +Rt ++k++w+++l Ote100042030081|100042030081 506 WTLAEVKKLIDGVSDYGVGRWSRIKKVFFsasAHRTSVDLKDKWRNLL 553 ****************************9*****************96 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.338 | 498 | 557 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 8.2E-13 | 498 | 556 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 7.9E-16 | 500 | 555 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 2.1E-10 | 502 | 555 | IPR001005 | SANT/Myb domain |
Pfam | PF13921 | 1.8E-7 | 506 | 559 | No hit | No description |
CDD | cd11660 | 1.85E-18 | 506 | 554 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 631 aa Download sequence Send to blast |
MENGPPSIGF EDGIVDVEGL LVEPQDEHVS VDSVTCLSEK IPEKAMDISE VSRRYGVTST 60 GAAHGGGDIL DRDVLDSLHT EDDGGYFRLQ NDFCSMGEEY LLGVGFSESI TDLEYVSSEC 120 LQNSVTDGPV LACAGIESPW KADLFRIMDV PECQNDVVCL KSSEICDTNS PHHKSERMTE 180 KKPPKSPDRN IGKVRDIPSC SFDGIPSDKN DTSQSQPVEK LSCPKNEKND EYRQACEIGE 240 TKRFQGQDAL VTFCSGENQS DAVPTLKRSR KPTKRYIDEV ADPILRHPKR RREVSSSTFR 300 DKSIRVKDHK KCLVGSKAMK LPDEESAVKA IQVPFGSLVH KECSESSAYN MVQCSDRRNL 360 MNKPKDNCIA SENQRKRDEW ALVVHQMKRS DGIPSASQKK KDHNFSGAQA TKRDQYTPTI 420 HLTKRNDSAT TASHKKKEKD ATGAHLMKSD DHLAAINQKT RENTAISVIP RKECATATCE 480 RKNEEDSLVA ESPEDVSGRR KHHRLWTLAE VKKLIDGVSD YGVGRWSRIK KVFFSASAHR 540 TSVDLKDKWR NLLKASDLQG QHNQQGEKKR NVAWRPLPKS ILRRVCELAA MHPYPKYGKP 600 KIAHIHHVSP DRSTDITLSD YRRILRSING N |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094643.1 | 0.0 | uncharacterized protein LOC105174291 isoform X1 | ||||
TrEMBL | A0A4D8ZY39 | 0.0 | A0A4D8ZY39_SALSN; Uncharacterized protein | ||||
STRING | Migut.L01689.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9155 | 17 | 23 |