PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100041470021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 207aa    MW: 23930.5 Da    PI: 9.9585
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100041470021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.54.5e-35161321128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lp GfrFhPtdeel+ +yLk+kv + +l++ +vi+e++ ++++PwdLp ++   +++ yfF+kr+    +    +  t+ g
  Ote100041470021|100041470021  16 LPIGFRFHPTDEELLIHYLKRKVLSLPLPA-SVIPEFEAFSFNPWDLPGEL---KEKRYFFCKRRMDLMN----KWNTDCG 88 
                                   699***************************.99***************554...4578*****9987643....347899* PP

                           NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWk++gkdk++l + + ++g+kkt++fy+gr+ k   t+W+m+e++l
  Ote100041470021|100041470021  89 YWKSSGKDKQILGAANYVIGIKKTFAFYQGRKLK---TQWIMQEFSL 132
                                   ****************************998876...********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-4212160IPR003441NAC domain
PROSITE profilePS5100543.09216160IPR003441NAC domain
PfamPF023651.3E-2317132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MECARKEKEN GGVNKLPIGF RFHPTDEELL IHYLKRKVLS LPLPASVIPE FEAFSFNPWD  60
LPGELKEKRY FFCKRRMDLM NKWNTDCGYW KSSGKDKQIL GAANYVIGIK KTFAFYQGRK  120
LKTQWIMQEF SLVGYLNTPF LHQRLGVQVG DWVVCRLYQR KRRARNRTAL ARNSTNDKTT  180
SFCSSFSSCS SGITEISSSE LDQEASS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-3151614169Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844037.15e-85PREDICTED: NAC domain-containing protein 68
TrEMBLA0A022QZ791e-83A0A022QZ79_ERYGU; Uncharacterized protein
STRINGMigut.F00031.1.p2e-84(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132501318